RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RXFP1Q9HBX9 757 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 WDR6Q9NNW5 1121 aaKnown RBP9.77□□□□□ -0.85
CAPN3-208ENST00000397204 KCNMB3Q9NPA1 279 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 PRDM9Q9NQV7 894 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 WNT16Q9UBV4 365 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 FBXL21Q9UKT6 434 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 DUSP12Q9UNI6 340 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 CYP46A1Q9Y6A2 500 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 DCHS1Q96JQ0 3298 aa9.77□□□□□ -0.85
CAPN3-208ENST00000397204 INPPL1O15357 1258 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 TEX28O15482 410 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 MARCH6O60337 910 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 PAPLNO95428 1278 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 EFEMP2O95967 443 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 POMCP01189 267 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 SSBP05455 408 aaKnown RBP eCLIP9.76□□□□□ -0.85
CAPN3-208ENST00000397204 PRKCSHP14314 528 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-208ENST00000397204 YWHABP31946 246 aaKnown RBP9.76□□□□□ -0.85
CAPN3-208ENST00000397204 AK2P54819 239 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 TOB2Q14106 344 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-208ENST00000397204 MXD4Q14582 209 aaPredicted RBP9.76□□□□□ -0.85
CAPN3-208ENST00000397204 NPY5RQ15761 445 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 PLA2G4FQ68DD2 849 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 TAS1R1Q7RTX1 841 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 FERMT3Q86UX7 667 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 COLGALT2Q8IYK4 626 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 SIX5Q8N196 739 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 SLC44A3Q8N4M1 653 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 DTWD2Q8NBA8 298 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 RNF149Q8NC42 400 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 SMG8Q8ND04 991 aaKnown RBP9.76□□□□□ -0.85
CAPN3-208ENST00000397204 TMEM143Q96AN5 459 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 COLEC11Q9BWP8 271 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 TM6SF1Q9BZW5 370 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 SEMA4AQ9H3S1 761 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 ZSWIM4Q9H7M6 989 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 VAV3Q9UKW4 847 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 KMT2EQ8IZD2 1858 aa9.76□□□□□ -0.85
CAPN3-208ENST00000397204 CCDC194A0A1B0GVG4 234 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 ARL5CA6NH57 179 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 C2CD2LO14523 706 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 SLC37A4O43826 429 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 ERLIN2O94905 339 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 BAG4O95429 457 aaKnown RBP9.75□□□□□ -0.85
CAPN3-208ENST00000397204 GLUD1P00367 558 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 XBP1P17861 261 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 OR1G1P47890 313 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 PTENP60484 403 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 DSG1Q02413 1049 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 DSC1Q08554 894 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 ANGPT1Q15389 498 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 XKR9Q5GH70 373 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 CWF19L1Q69YN2 538 aaKnown RBP9.75□□□□□ -0.85
CAPN3-208ENST00000397204 ERMP1Q7Z2K6 904 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 NEK8Q86SG6 692 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 HACE1Q8IYU2 909 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 RNF168Q8IYW5 571 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-208ENST00000397204 HERC2P3Q9BVR0 1158 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 CSRNP2Q9H175 543 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 MAN1C1Q9NR34 630 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.75□□□□□ -0.85
CAPN3-208ENST00000397204 CHST7Q9NS84 486 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.75□□□□□ -0.85
CAPN3-208ENST00000397204 WRAP73Q9P2S5 460 aaPredicted RBP9.75□□□□□ -0.85
CAPN3-208ENST00000397204 EPS15L1Q9UBC2 864 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 GIT1Q9Y2X7 761 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 IPPQ9Y573 584 aa9.75□□□□□ -0.85
CAPN3-208ENST00000397204 N4BP1O75113 896 aaKnown RBP9.74□□□□□ -0.85
CAPN3-208ENST00000397204 CDKL5O76039 1030 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 SLITRK3O94933 977 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 GBP2P32456 591 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-208ENST00000397204 GLUD2P49448 558 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 TFDP1Q14186 410 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 EMC2Q15006 297 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 USP41Q3LFD5 358 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 NOTUMQ6P988 496 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 LILRA6Q6PI73 481 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 SLFN12Q8IYM2 578 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 ADSSL1Q8N142 457 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 FEZF2Q8TBJ5 459 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 HAS1Q92839 578 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 GAD1Q99259 594 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 LXNQ9BS40 222 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 PHF20Q9BVI0 1012 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 MARCH5Q9NX47 278 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 MIOSQ9NXC5 875 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 ZDHHC7Q9NXF8 308 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 RGL1Q9NZL6 768 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 FNIP2Q9P278 1114 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 KCNJ14Q9UNX9 436 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 PRG3Q9Y2Y8 225 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-208ENST00000397204 ZFP37Q9Y6Q3 630 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-208ENST00000397204 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
CAPN3-208ENST00000397204 KRBA1A5PL33 1030 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 INO80B-WBP1J3KQ70 363 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 ZBTB39O15060 712 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 NARSO43776 548 aaKnown RBP9.73□□□□□ -0.85
CAPN3-208ENST00000397204 CCNT1O60563 726 aaKnown RBP9.73□□□□□ -0.85
CAPN3-208ENST00000397204 TSPAN1O60635 241 aa9.73□□□□□ -0.85
CAPN3-208ENST00000397204 RFPL2O75678 378 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms