RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 AKAP5P24588 427 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 MARCKSP29966 332 aaPredicted RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 SCNN1GP51170 649 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 NCKAP1LP55160 1127 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 DLX2Q07687 328 aaPredicted RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 STRN3Q13033 797 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 TUSC3Q13454 348 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 KARSQ15046 597 aaKnown RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 PLPP4Q5VZY2 271 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 FAM173BQ6P4H8 233 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 TAS1R3Q7RTX0 852 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 PPFIBP1Q86W92 1011 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 TMEM173Q86WV6 379 aaPredicted RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 CDR2LQ86X02 465 aaPredicted RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 RNF168Q8IYW5 571 aaPredicted RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 LINC00301Q8NCQ3 95 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 RASSF8Q8NHQ8 419 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 EPSTI1Q96J88 318 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 USP28Q96RU2 1077 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 RPS6KC1Q96S38 1066 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 PLIN2Q99541 437 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 KIFC3Q9BVG8 833 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 PARVGQ9HBI0 331 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 POLD4Q9HCU8 107 aa12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 TOPORSQ9NS56 1045 aaPredicted RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.18□□□□□ -0.46
NDUFA9-202ENST00000396655 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 PER2O15055 1255 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 SLC16A4O15374 487 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 LINC01565O15544 149 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 MBTPS2O43462 519 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 LILRB3O75022 631 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 RECQL4O94761 1208 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 YEATS4O95619 227 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 SOD2P04179 222 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 EDN1P05305 212 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 ZSCAN22P10073 491 aaPredicted RBP12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 GRM5P41594 1212 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 OR1G1P47890 313 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 KYAT1Q16773 422 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 XKR4Q5GH76 650 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 EEF1DP3Q658K8 133 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 MPZL3Q6UWV2 235 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 ALKAL1Q6UXT8 129 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 CCDC73Q6ZRK6 1079 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 HAUS6Q7Z4H7 955 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 GPBP1Q86WP2 473 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 ADHFE1Q8IWW8 467 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 BCL7CQ8WUZ0 217 aaPredicted RBP12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 CASP10Q92851 521 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 CCDC94Q9BW85 323 aaPredicted RBP12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 APOL6Q9BWW8 343 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 C1QTNF1Q9BXJ1 281 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 EMILIN2Q9BXX0 1053 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 ST6GALNAC4Q9H4F1 302 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 MRPL17Q9NRX2 175 aaKnown RBP12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 CHST7Q9NS84 486 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 SNTG2Q9NY99 539 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 PCDHGC5Q9Y5F6 944 aa12.17□□□□□ -0.46
NDUFA9-202ENST00000396655 ABLIM1O14639 778 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 PTGESO14684 152 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 SPTLC2O15270 562 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 CLDN3O15551 220 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 CLASP2O75122 1294 aaKnown RBP12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 FAM13AO94988 1023 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 LIG1P18858 919 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 YARSP54577 528 aaKnown RBP12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 CEBPZQ03701 1054 aaKnown RBP12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 RAD51AP2Q09MP3 1159 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 MCM6Q14566 821 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 PTPN14Q15678 1187 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 NAB2Q15742 525 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 KIAA0319Q5VV43 1072 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 RRAGBQ5VZM2 374 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 USP49Q70CQ1 688 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 SV2BQ7L1I2 683 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 GJD3Q8N144 294 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 VN1R2Q8NFZ6 395 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 LRRC15Q8TF66 581 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 UROC1Q96N76 676 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 TSPAN18Q96SJ8 248 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 TCHPQ9BT92 498 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 LRFN3Q9BTN0 628 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 TARS2Q9BW92 718 aaKnown RBP12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 VN1R3Q9BXE9 311 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 CDT1Q9H211 546 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 DZANK1Q9NVP4 752 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 MARCH5Q9NX47 278 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
NDUFA9-202ENST00000396655 ADAM28Q9UKQ2 775 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms