RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.22■■□□□ 1.31
FXN-202ENST00000396364 CLIC2O15247 247 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 EXTL3O43909 919 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 EXOC3O60645 756 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 RECQL4O94761 1208 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 ATF7P17544 494 aaPredicted RBP23.21■■□□□ 1.31
FXN-202ENST00000396364 ADSSP30520 456 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 OSTNP61366 133 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 PPP2R3AQ06190 1150 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 RAB30Q15771 203 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 KLHL10Q6JEL2 608 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 FOXR2Q6PJQ5 311 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 SLC9A9Q8IVB4 645 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 CRIPAKQ8N1N5 446 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 NOC3LQ8WTT2 800 aaKnown RBP23.21■■□□□ 1.31
FXN-202ENST00000396364 TSPAN18Q96SJ8 248 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 CBWD1Q9BRT8 395 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 PCIF1Q9H4Z3 704 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 PLEKHA5Q9HAU0 1116 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 MSRAQ9UJ68 235 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 FRMD4BQ9Y2L6 1034 aa23.21■■□□□ 1.31
FXN-202ENST00000396364 CITO14578 2027 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 CARNS1A5YM72 827 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 ZNF233A6NK53 670 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 PPP1R3GB7ZBB8 358 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 TISP43B9A030 160 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 FGFR1OPO95684 399 aaKnown RBP23.2■■□□□ 1.3
FXN-202ENST00000396364 NR3C1P04150 777 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 CCDC192P0DO97 292 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 BMP6P22004 513 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 AKAP5P24588 427 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 CYP2J2P51589 502 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 AGMOQ6ZNB7 445 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 CMTR2Q8IYT2 770 aaKnown RBP23.2■■□□□ 1.3
FXN-202ENST00000396364 NELFBQ8WX92 580 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 LPPQ93052 612 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 FAM213AQ9BRX8 229 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 NAT10Q9H0A0 1025 aaKnown RBP23.2■■□□□ 1.3
FXN-202ENST00000396364 PCDHA11Q9Y5I1 949 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 PTPRSQ13332 1948 aa23.2■■□□□ 1.3
FXN-202ENST00000396364 TBKBP1A7MCY6 615 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 CETN3O15182 167 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 IL18RAPO95256 599 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 FGFR1P11362 822 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 NR2F2P24468 414 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 HTRA4P83105 476 aaPredicted RBP23.19■■□□□ 1.3
FXN-202ENST00000396364 FKBP3Q00688 224 aaKnown RBP23.19■■□□□ 1.3
FXN-202ENST00000396364 BTG3Q14201 252 aaPredicted RBP23.19■■□□□ 1.3
FXN-202ENST00000396364 SURF1Q15526 300 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 NOMO2Q5JPE7 1267 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 USP37Q86T82 979 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 LRRC43Q8N309 656 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 CEP120Q8N960 986 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 HELQQ8TDG4 1101 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 SAAL1Q96ER3 474 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 HAPLN2Q9GZV7 340 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 IKZF4Q9H2S9 585 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 SEMA6BQ9H3T3 888 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 CPSF3Q9UKF6 684 aaKnown RBP23.19■■□□□ 1.3
FXN-202ENST00000396364 CTNND2Q9UQB3 1225 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 COLQQ9Y215 455 aaPredicted RBP23.19■■□□□ 1.3
FXN-202ENST00000396364 INPP5FQ9Y2H2 1132 aa23.19■■□□□ 1.3
FXN-202ENST00000396364 ARL5CA6NH57 179 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 XPOTO43592 962 aaKnown RBP23.18■■□□□ 1.3
FXN-202ENST00000396364 OFD1O75665 1012 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 ERCC5P28715 1186 aaPredicted RBP23.18■■□□□ 1.3
FXN-202ENST00000396364 MLH1P40692 756 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 ACOT2P49753 483 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 RNASELQ05823 741 aaKnown RBP23.18■■□□□ 1.3
FXN-202ENST00000396364 ADAM9Q13443 819 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 DPCR1Q3MIW9 517 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 FAM193BQ96PV7 902 aaPredicted RBP23.18■■□□□ 1.3
FXN-202ENST00000396364 RNF39Q9H2S5 420 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 RBAKQ9NYW8 714 aaPredicted RBP23.18■■□□□ 1.3
FXN-202ENST00000396364 RWDD2AQ9UIY3 292 aa23.18■■□□□ 1.3
FXN-202ENST00000396364 INPPL1O15357 1258 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 CD44P16070 742 aaKnown RBP23.17■■□□□ 1.3
FXN-202ENST00000396364 SMAD3P84022 425 aaKnown RBP23.17■■□□□ 1.3
FXN-202ENST00000396364 SNRNP35Q16560 246 aaKnown RBP23.17■■□□□ 1.3
FXN-202ENST00000396364 TPD52L1Q16890 204 aaPredicted RBP23.17■■□□□ 1.3
FXN-202ENST00000396364 ZCWPW2Q504Y3 356 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 CLLU1OSQ5K130 101 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 CEP135Q66GS9 1140 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 FIBCD1Q8N539 461 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 ZNF689Q96CS4 500 aaPredicted RBP23.17■■□□□ 1.3
FXN-202ENST00000396364 GAD1Q99259 594 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 ASB7Q9H672 318 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 SLC38A7Q9NVC3 462 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 RALGAPA2Q2PPJ7 1873 aa23.17■■□□□ 1.3
FXN-202ENST00000396364 FNDC1Q4ZHG4 1894 aaPredicted RBP23.17■■□□□ 1.3
FXN-202ENST00000396364 COL4A6Q14031 1691 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 FAM189A1O60320 539 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 THP07101 528 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 CXCL8P10145 99 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 TNFSF9P41273 254 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 TYRO3Q06418 890 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 GRIK3Q13003 919 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 LRIT3Q3SXY7 679 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 SEZ6Q53EL9 994 aa23.16■■□□□ 1.3
FXN-202ENST00000396364 ANKRD40Q6AI12 368 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms