RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 CUL1Q13616 776 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 SEZ6Q53EL9 994 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 CIAPIN1Q6FI81 312 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 CBWD2Q8IUF1 395 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 RFFLQ8WZ73 363 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 TAAR1Q96RJ0 339 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 KLC4Q9NSK0 619 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 RNF14Q9UBS8 474 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 APEX2Q9UBZ4 518 aa9.98□□□□□ -0.81
NDE1-201ENST00000396354 TTC7AQ9ULT0 858 aaPredicted RBP9.98□□□□□ -0.81
NDE1-201ENST00000396354 ZNF541Q9H0D2 1346 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 VCAM1P19320 739 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 GMPSP49915 693 aaPredicted RBP9.97□□□□□ -0.81
NDE1-201ENST00000396354 TTC27Q6P3X3 843 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 PADI6Q6TGC4 694 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 LRRC34Q8IZ02 419 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 SYCE1Q8N0S2 351 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 NEK9Q8TD19 979 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 CHURC1Q8WUH1 139 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 CPA5Q8WXQ8 436 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 BICD1Q96G01 975 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 MXRA8Q9BRK3 442 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 FEM1BQ9UK73 627 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 LCTP09848 1927 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 PHIPQ8WWQ0 1821 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 ASNSP08243 561 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 MAP2K2P36507 400 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 ITIH3Q06033 890 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 MFSD10Q14728 455 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 MICALL2Q8IY33 904 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 SYTL5Q8TDW5 730 aaPredicted RBP9.97□□□□□ -0.81
NDE1-201ENST00000396354 SYN2Q92777 582 aaPredicted RBP9.97□□□□□ -0.81
NDE1-201ENST00000396354 HVCN1Q96D96 273 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 C9orf72Q96LT7 481 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 EDEM3Q9BZQ6 932 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 METTL14Q9HCE5 456 aaKnown RBP9.97□□□□□ -0.81
NDE1-201ENST00000396354 HACL1Q9UJ83 578 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 MRPL11Q9Y3B7 192 aaKnown RBP9.97□□□□□ -0.81
NDE1-201ENST00000396354 L3MBTL1Q9Y468 752 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 O00370 1275 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 PLA2G6O60733 806 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 ZNF280AP59817 542 aaPredicted RBP9.97□□□□□ -0.81
NDE1-201ENST00000396354 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 MIER3Q7Z3K6 550 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 IFNL1Q8IU54 200 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 ZDHHC14Q8IZN3 488 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 ERP44Q9BS26 406 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 NUP85Q9BW27 656 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 OLFML3Q9NRN5 406 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 TRIM33Q9UPN9 1127 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 BZW2Q9Y6E2 419 aaKnown RBP9.97□□□□□ -0.81
NDE1-201ENST00000396354 GJA3Q9Y6H8 435 aa9.97□□□□□ -0.81
NDE1-201ENST00000396354 SSC5DA1L4H1 1573 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 PI4K2BG5E9Z4 385 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 GOLGA8SH3BPF8 625 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 GOLGA8MH3BSY2 632 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 SKAP2O75563 359 aaPredicted RBP9.96□□□□□ -0.81
NDE1-201ENST00000396354 UPP2O95045 317 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 CCNE2O96020 404 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 GH1P01241 217 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 ZNF131P52739 623 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 RPS6P62753 249 aaKnown RBP9.96□□□□□ -0.81
NDE1-201ENST00000396354 BFSP1Q12934 665 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 KYNUQ16719 465 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 TKFCQ3LXA3 575 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 SEL1L2Q5TEA6 688 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 GIMAP7Q8NHV1 300 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 ACTRT1Q8TDG2 376 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 ATG4CQ96DT6 458 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 AGPAT1Q99943 283 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 SLC38A10Q9HBR0 1119 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 TUFT1Q9NNX1 390 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 FGFR1OP2Q9NVK5 253 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 KIAA1217Q5T5P2 1943 aa9.96□□□□□ -0.81
NDE1-201ENST00000396354 H0YGN5 161 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 LMNB1P20700 586 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 NUGGCQ68CJ6 796 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 CYFIP1Q7L576 1253 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 GSTA5Q7RTV2 222 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 ZNF720Q7Z2F6 126 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 PLEKHO2Q8TD55 490 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 PCDHB18PQ96TA0 734 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 STRA6Q9BX79 667 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 GPR88Q9GZN0 384 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 NFS1Q9Y697 457 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 DOCK1Q14185 1865 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 LTBP3Q9NS15 1303 aa9.96□□□□□ -0.82
NDE1-201ENST00000396354 SLC26A4O43511 780 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 MXI1P50539 228 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 PPATQ06203 517 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 CALCOCO2Q13137 446 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 PRKG1Q13976 671 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 GPR162Q16538 588 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 XKR9Q5GH70 373 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 SPOPLQ6IQ16 392 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 ZNF572Q7Z3I7 529 aaPredicted RBP9.95□□□□□ -0.82
NDE1-201ENST00000396354 FAM160B2Q86V87 743 aa9.95□□□□□ -0.82
NDE1-201ENST00000396354 SRRM1Q8IYB3 904 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms