RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 GRM6O15303 877 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 CLDN3O15551 220 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 ITGB1P05556 798 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 LAG3P18627 525 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 GRM5P41594 1212 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 MATR3P43243 847 aaKnown RBP eCLIP18.11■□□□□ 0.49
CXCL1-201ENST00000395761 RNASELQ05823 741 aaKnown RBP18.11■□□□□ 0.49
CXCL1-201ENST00000395761 MCL1Q07820 350 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
CXCL1-201ENST00000395761 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
CXCL1-201ENST00000395761 KCNT2Q6UVM3 1135 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 HVCN1Q96D96 273 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 ACCSQ96QU6 501 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 C11orf84Q9BUA3 381 aaPredicted RBP18.11■□□□□ 0.49
CXCL1-201ENST00000395761 AAASQ9NRG9 546 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 KANSL3Q9P2N6 904 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 DNAJB4Q9UDY4 337 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 PLAGL2Q9UPG8 496 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 PCDHB12Q9Y5F1 795 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 MTCH2Q9Y6C9 303 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 KIAA1671Q9BY89 1806 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 NLRC5Q86WI3 1866 aa18.11■□□□□ 0.49
CXCL1-201ENST00000395761 NT5C1B-RDH14C9J2C7 533 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 PTGESO14684 152 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 MEFVO15553 781 aaPredicted RBP18.1■□□□□ 0.49
CXCL1-201ENST00000395761 ZC3H11AO75152 810 aaKnown RBP eCLIP18.1■□□□□ 0.49
CXCL1-201ENST00000395761 ABCD1P33897 745 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 HOXD13P35453 343 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 BCAR1P56945 870 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 FAM160A1Q05DH4 1040 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 KMT5BQ4FZB7 885 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 FAM26FQ5R3K3 315 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 EPM2AIP1Q7L775 607 aaPredicted RBP18.1■□□□□ 0.49
CXCL1-201ENST00000395761 SPPL3Q8TCT6 385 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 RSPH1Q8WYR4 309 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 P2RX5Q93086 422 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 ZNF558Q96NG5 402 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 SLC39A2Q9NP94 309 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 STXBP5LQ9Y2K9 1186 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 TRANK1O15050 2925 aa18.1■□□□□ 0.49
CXCL1-201ENST00000395761 RALGAPA2Q2PPJ7 1873 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 A0A0B4J269 797 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 NR1I2O75469 434 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 FGF18O76093 207 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 GALTP07902 379 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 POU3F3P20264 500 aaPredicted RBP18.09■□□□□ 0.49
CXCL1-201ENST00000395761 PTMSP20962 102 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 DNAJB1P25685 340 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 SLC11A1P49279 550 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 DPYDQ12882 1025 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 ALCAMQ13740 583 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 ZBTB41Q5SVQ8 909 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 TMEM173Q86WV6 379 aaPredicted RBP18.09■□□□□ 0.49
CXCL1-201ENST00000395761 ACAP3Q96P50 834 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 FAM193BQ96PV7 902 aaPredicted RBP18.09■□□□□ 0.49
CXCL1-201ENST00000395761 CCDC94Q9BW85 323 aaPredicted RBP18.09■□□□□ 0.49
CXCL1-201ENST00000395761 STYXL1Q9Y6J8 313 aa18.09■□□□□ 0.49
CXCL1-201ENST00000395761 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
CXCL1-201ENST00000395761 ZMYM2Q9UBW7 1377 aa18.08■□□□□ 0.49
CXCL1-201ENST00000395761 FAM189A1O60320 539 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 CSPG5O95196 566 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 RPN1P04843 607 aaKnown RBP18.08■□□□□ 0.48
CXCL1-201ENST00000395761 MYL1P05976 194 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 ADSSP30520 456 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 TNFSF9P41273 254 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 ALDH7A1P49419 539 aaKnown RBP18.08■□□□□ 0.48
CXCL1-201ENST00000395761 DSC1Q08554 894 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 STK4Q13043 487 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 CAMK1Q14012 370 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 ALKAL1Q6UXT8 129 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 COLGALT2Q8IYK4 626 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 SYCP3Q8IZU3 236 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 BCL7CQ8WUZ0 217 aaPredicted RBP18.08■□□□□ 0.48
CXCL1-201ENST00000395761 RPS6KC1Q96S38 1066 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 MSTO1Q9BUK6 570 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 SPG21Q9NZD8 308 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 CACNG4Q9UBN1 327 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 EXOC7Q9UPT5 735 aa18.08■□□□□ 0.48
CXCL1-201ENST00000395761 YARSP54577 528 aaKnown RBP18.07■□□□□ 0.48
CXCL1-201ENST00000395761 GRIK3Q13003 919 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 PNOCQ13519 176 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 NAB2Q15742 525 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 CCDC85BQ15834 202 aaPredicted RBP18.07■□□□□ 0.48
CXCL1-201ENST00000395761 SLC10A6Q3KNW5 377 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 GLRA4Q5JXX5 417 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 SLFN12LQ6IEE8 588 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 MICALL1Q8N3F8 863 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 ZNF507Q8TCN5 953 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 SCFD1Q8WVM8 642 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 RABGGTAQ92696 567 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 EXOC1Q9NV70 894 aa18.07■□□□□ 0.48
CXCL1-201ENST00000395761 SMIM28A0A1B0GU29 152 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 NRP1O14786 923 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 OGTO15294 1046 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 EIF3DO15371 548 aaKnown RBP eCLIP18.06■□□□□ 0.48
CXCL1-201ENST00000395761 ALDH2P05091 517 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 THP07101 528 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 CLTAP09496 248 aa18.06■□□□□ 0.48
CXCL1-201ENST00000395761 CXCL8P10145 99 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms