RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 UTP4Q969X6 686 aaKnown RBP15.31■□□□□ 0.04
CLIP2-203ENST00000395060 CBWD1Q9BRT8 395 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 ZCWPW1Q9H0M4 648 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 C12orf65Q9H3J6 166 aaKnown RBP15.31■□□□□ 0.04
CLIP2-203ENST00000395060 QTRT2Q9H974 415 aaKnown RBP15.31■□□□□ 0.04
CLIP2-203ENST00000395060 BTAF1O14981 1849 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 TMEM150BA6NC51 233 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 MAP3K13O43283 966 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 ATP2B4P23634 1241 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 YY1P25490 414 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 EPHB2P29323 1055 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 SHMT1P34896 483 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 TUBP50607 506 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 RBM5P52756 815 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLIP2-203ENST00000395060 SLC8A3P57103 927 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 LONP2Q86WA8 852 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 ART4Q93070 314 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 SAAL1Q96ER3 474 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 BORCS6Q96GS4 357 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 WRAP73Q9P2S5 460 aaPredicted RBP15.31■□□□□ 0.04
CLIP2-203ENST00000395060 NAALADL1Q9UQQ1 740 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 R3HDM2Q9Y2K5 976 aaKnown RBP15.31■□□□□ 0.04
CLIP2-203ENST00000395060 PCDHA3Q9Y5H8 950 aa15.31■□□□□ 0.04
CLIP2-203ENST00000395060 AP1G2O75843 785 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 SMARCA1P28370 1054 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 HSPA1LP34931 641 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 ZNF483Q8TF39 744 aaPredicted RBP15.3■□□□□ 0.04
CLIP2-203ENST00000395060 LENG9Q96B70 501 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 METTL5Q9NRN9 209 aaKnown RBP15.3■□□□□ 0.04
CLIP2-203ENST00000395060 USTQ9Y2C2 406 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 SNHG28P0DPA3 235 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 PEX5P50542 639 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 BFSP1Q12934 665 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 RHOT2Q8IXI1 618 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 RXFP1Q9HBX9 757 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 PARP2Q9UGN5 583 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 LAMB2P55268 1798 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 PCNTO95613 3336 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 K7ENM7 598 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 SLC16A3O15427 465 aaKnown RBP15.3■□□□□ 0.04
CLIP2-203ENST00000395060 CTNNA2P26232 953 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 SARNPP82979 210 aaKnown RBP15.3■□□□□ 0.04
CLIP2-203ENST00000395060 GALNTL6Q49A17 601 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 KAZNQ674X7 775 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 MIS18BP1Q6P0N0 1132 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 FOXR2Q6PJQ5 311 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 MAB21L3Q8N8X9 362 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 SUPT20HQ8NEM7 779 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 NAF1Q96HR8 494 aaKnown RBP15.3■□□□□ 0.04
CLIP2-203ENST00000395060 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 PCYOX1Q9UHG3 505 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 CNOT7Q9UIV1 285 aaKnown RBP15.3■□□□□ 0.04
CLIP2-203ENST00000395060 DCTN4Q9UJW0 460 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 ANAPC5Q9UJX4 755 aa15.3■□□□□ 0.04
CLIP2-203ENST00000395060 TNRC6CQ9HCJ0 1690 aaKnown RBP15.3■□□□□ 0.04
CLIP2-203ENST00000395060 SMNDC1O75940 238 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLIP2-203ENST00000395060 BCRP11274 1271 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 GM2AP17900 193 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 RIPK1Q13546 671 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 GPATCH4Q5T3I0 446 aaKnown RBP15.29■□□□□ 0.04
CLIP2-203ENST00000395060 GSTA5Q7RTV2 222 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 CKAP2Q8WWK9 683 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 NUDCD1Q96RS6 583 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 KIAA1683Q9H0B3 1180 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 ARHGEF3Q9NR81 526 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 SPDYE5A6NIY4 337 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 OAS1P00973 400 aaKnown RBP15.29■□□□□ 0.04
CLIP2-203ENST00000395060 KRT5P13647 590 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 OVGP1Q12889 678 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 ZYXQ15942 572 aaKnown RBP15.29■□□□□ 0.04
CLIP2-203ENST00000395060 CCDC174Q6PII3 467 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 FBF1Q8TES7 1133 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 HAUS1Q96CS2 278 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 ANAPC7Q9UJX3 599 aa15.29■□□□□ 0.04
CLIP2-203ENST00000395060 DPPA5A6NC42 116 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 GOLGA8SH3BPF8 625 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 GOLGA8MH3BSY2 632 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 SLITRK3O94933 977 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 EYA4O95677 639 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 KRT15P19012 456 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 PPP2R5EQ16537 467 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 SYT11Q9BT88 431 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 PI4K2AQ9BTU6 479 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 ZC3H12CQ9C0D7 883 aaKnown RBP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 PIDD1Q9HB75 910 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 TOPORSQ9NS56 1045 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 NINJ2Q9NZG7 142 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 SUGT1Q9Y2Z0 365 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 DDX60LQ5H9U9 1706 aaKnown RBP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 TP73O15350 636 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 GJB6O95452 261 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 ATF2P15336 505 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 ZNF131P52739 623 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 RWDD2BP57060 319 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 RUNDC3BQ96NL0 473 aa15.28■□□□□ 0.04
CLIP2-203ENST00000395060 KLF6Q99612 283 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-203ENST00000395060 SPATS2LQ9NUQ6 558 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms