RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ANKRD27Q96NW4 1050 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 NT5C1BQ96P26 610 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 TRAIPQ9BWF2 469 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 AVENQ9NQS1 362 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 HSPBP1Q9NZL4 362 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 ASIC3Q9UHC3 531 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 BAIAP2L1Q9UHR4 511 aa10.75□□□□□ -0.69
UBE2D3-208ENST00000394803 ZC3H11AO75152 810 aaKnown RBP eCLIP10.74□□□□□ -0.693e-19■□□□□ 8.5
UBE2D3-208ENST00000394803 ATP5HO75947 161 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 LYPLA2O95372 231 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 OAS1P00973 400 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 RARAP10276 462 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 ATF2P15336 505 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 GBP2P32456 591 aaPredicted RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 BPIFB4P59827 614 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 GTF2BQ00403 316 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 ZNF268Q14587 947 aaPredicted RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 STAT4Q14765 748 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CRYMQ14894 314 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 ACAD10Q6JQN1 1059 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 POTEAQ6S8J7 498 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CCDC25Q86WR0 208 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 PALB2Q86YC2 1186 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 ARHGEF19Q8IW93 802 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 SAMD3Q8N6K7 520 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 RDH13Q8NBN7 331 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 DHX38Q92620 1227 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 N4BP2L2Q92802 583 aaPredicted RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 RAB3IPQ96QF0 476 aaPredicted RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 MXRA8Q9BRK3 442 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 DEFB129Q9H1M3 183 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CDC42EP4Q9H3Q1 356 aaKnown RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 PPCSQ9HAB8 311 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 DONSONQ9NYP3 566 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 TMOD2Q9NZR1 351 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 TCEAL9Q9UHQ7 104 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 LGALS13Q9UHV8 139 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 NRXN2Q9P2S2 1712 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 THAP12O43422 761 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 SORBS3O60504 671 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CDH16O75309 829 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 GDF11O95390 407 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 TTC4O95801 387 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 GH2P01242 217 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CCND1P24385 295 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 GCLMP48507 274 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 GPC3P51654 580 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 SNAP25P60880 206 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 LACTBP83111 547 aaPredicted RBP10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CCDC15Q0P6D6 951 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 PTP4A2Q12974 167 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CCDC174Q6PII3 467 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 SPATA21Q7Z572 469 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 EXOC3L1Q86VI1 746 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 RELL1Q8IUW5 271 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 ZFPM1Q8IX07 1006 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 SEPT12Q8IYM1 358 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 ANKRD35Q8N283 1001 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 PPM1KQ8N3J5 372 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CCDC89Q8N998 374 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 CKAP2Q8WWK9 683 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 MAGEB18Q96M61 343 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 RXFP1Q9HBX9 757 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 TMEM8AQ9HCN3 771 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 UBN1Q9NPG3 1134 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 KLHL14Q9P2G3 628 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 PTPN22Q9Y2R2 807 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 COQ4Q9Y3A0 265 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 ADGRA3Q8IWK6 1321 aa10.74□□□□□ -0.69
UBE2D3-208ENST00000394803 TMEM120BA0PK00 339 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 BACH1O14867 736 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 GJB6O95452 261 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 SGPL1O95470 568 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 NQO1P15559 274 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 CHRNB2P17787 502 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 MAPK4P31152 587 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 COPS2P61201 443 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 PPP3CAQ08209 521 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 RRP1BQ14684 758 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 ZNF568Q3ZCX4 644 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 CC2D2BQ6DHV5 1058 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 NOP9Q86U38 636 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 KSR1Q8IVT5 923 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 ATL2Q8NHH9 583 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 FBF1Q8TES7 1133 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 MAP3K20Q9NYL2 800 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 NOP53Q9NZM5 478 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 ANAPC5Q9UJX4 755 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 TMX2Q9Y320 296 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 LOC102724159A0A0B4J2E5 919 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 FAM196BA6NMK8 535 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 CLTAP09496 248 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 CYP11B1P15538 503 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 STX2P32856 288 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 SLCO1A2P46721 670 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 QARSP47897 775 aaKnown RBP10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 IFNAR2P48551 515 aa10.73□□□□□ -0.69
UBE2D3-208ENST00000394803 MARCKSL1P49006 195 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms