RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SKIP12755 728 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 FGFR2P21802 821 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 PAPOLAP51003 745 aaKnown RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 SPATA20Q8TB22 786 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 FAM84BQ96KN1 310 aaPredicted RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 C11orf70Q9BRQ4 267 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 PI4K2AQ9BTU6 479 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
RTN4-206ENST00000394611 GGA1Q9UJY5 639 aa9.41□□□□□ -0.9
RTN4-206ENST00000394611 RFX7Q2KHR2 1363 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 DPPA5A6NC42 116 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 PIK3R2O00459 728 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 MAP3K7O43318 606 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 SUPT3HO75486 399 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 BANF1O75531 89 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 RASSF9O75901 435 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 AKAP3O75969 853 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 STRN3Q13033 797 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 THOC5Q13769 683 aaKnown RBP9.4□□□□□ -0.9
RTN4-206ENST00000394611 MTDHQ86UE4 582 aaKnown RBP9.4□□□□□ -0.9
RTN4-206ENST00000394611 ZSWIM2Q8NEG5 633 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.4□□□□□ -0.94e-6■■□□□ 11.4
RTN4-206ENST00000394611 REEP2Q9BRK0 252 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 CCSER1Q9C0I3 900 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 LZTS1Q9Y250 596 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 LOC100653049A0A140TA62 436 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 H3BRJ5 948 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 MAPK13O15264 365 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 NVLO15381 856 aaKnown RBP9.4□□□□□ -0.9
RTN4-206ENST00000394611 KRT34O76011 436 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 SNUPNO95149 360 aaKnown RBP9.4□□□□□ -0.9
RTN4-206ENST00000394611 FERP16591 822 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 YBX3P16989 372 aaKnown RBP eCLIP9.4□□□□□ -0.92e-23■□□□□ 9.5
RTN4-206ENST00000394611 C1orf146Q5VVC0 180 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 PALB2Q86YC2 1186 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 SLC26A7Q8TE54 656 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 PRPF31Q8WWY3 499 aaKnown RBP9.4□□□□□ -0.9
RTN4-206ENST00000394611 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 AK8Q96MA6 479 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 INPP4AQ96PE3 977 aaPredicted RBP9.4□□□□□ -0.9
RTN4-206ENST00000394611 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.4□□□□□ -0.9
RTN4-206ENST00000394611 LRRC37AA6NMS7 1700 aa9.4□□□□□ -0.9
RTN4-206ENST00000394611 WDR19Q8NEZ3 1342 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 PYGLP06737 847 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 ITGA8P53708 1063 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 ALDH18A1P54886 795 aaKnown RBP9.4□□□□□ -0.91
RTN4-206ENST00000394611 FAM102BQ5T8I3 360 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 CCDC89Q8N998 374 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 B4GALNT2Q8NHY0 566 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 KAT5Q92993 513 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 ATXN7L3BQ96GX2 97 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 THTPAQ9BU02 230 aa9.4□□□□□ -0.91
RTN4-206ENST00000394611 DDX18Q9NVP1 670 aaKnown RBP9.4□□□□□ -0.91
RTN4-206ENST00000394611 GOLGA4Q13439 2230 aaKnown RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 SSU72P8A0A1W2PR75 194 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 GAS7O60861 476 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 TOM1L1O75674 476 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 STAMBPO95630 424 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 POTEJP0CG39 1038 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 LMNB1P20700 586 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 RASA3Q14644 834 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 FAM228AQ86W67 206 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 BAP1Q92560 729 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 FAM237AA0A1B0GTK4 181 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 FOXN3O00409 490 aaPredicted RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 HNRNPCP07910 306 aaKnown RBP eCLIP9.39□□□□□ -0.91
RTN4-206ENST00000394611 KRT10P13645 584 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 NCF2P19878 526 aaPredicted RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 CCND1P24385 295 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 GSCP56915 257 aaPredicted RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 SLC8A3P57103 927 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 ALX1Q15699 326 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 C3orf20Q8ND61 904 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 CYP2W1Q8TAV3 490 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 ZNF564Q8TBZ8 553 aaPredicted RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 CFAP36Q96G28 342 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 RUSC1Q9BVN2 902 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 MYLK2Q9H1R3 596 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 ZWILCHQ9H900 591 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 ZNF277Q9NRM2 450 aaPredicted RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.39□□□□□ -0.91
RTN4-206ENST00000394611 CHMP2BQ9UQN3 213 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.39□□□□□ -0.91
RTN4-206ENST00000394611 DUOX1Q9NRD9 1551 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 GNA14O95837 355 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 ATP4AP20648 1035 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 PON1P27169 355 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 PPATQ06203 517 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 GPS1Q13098 491 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 IZUMO3Q5VZ72 239 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 CENPPQ6IPU0 288 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 SYT2Q8N9I0 419 aaPredicted RBP9.39□□□□□ -0.91
RTN4-206ENST00000394611 UCMAQ8WVF2 138 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 RFFLQ8WZ73 363 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 STK17AQ9UEE5 414 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 EMSYQ7Z589 1322 aa9.39□□□□□ -0.91
RTN4-206ENST00000394611 HLA-DOAP06340 250 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 MX2P20592 715 aa9.38□□□□□ -0.91
RTN4-206ENST00000394611 ATP2B4P23634 1241 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms