RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
CCT4-201ENST00000394440 HELQQ8TDG4 1101 aa16.18■□□□□ 0.18
CCT4-201ENST00000394440 ANKRD7Q92527 254 aa16.18■□□□□ 0.18
CCT4-201ENST00000394440 KAT5Q92993 513 aa16.18■□□□□ 0.18
CCT4-201ENST00000394440 PACSIN1Q9BY11 444 aa16.18■□□□□ 0.18
CCT4-201ENST00000394440 RBAKQ9NYW8 714 aaPredicted RBP16.18■□□□□ 0.18
CCT4-201ENST00000394440 GJD2Q9UKL4 321 aa16.18■□□□□ 0.18
CCT4-201ENST00000394440 TMEM88BA6NKF7 163 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 BTNL10A8MVZ5 291 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 ACKR2O00590 384 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 CLDN3O15551 220 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 CCDC172P0C7W6 258 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 IGBP1P78318 339 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 MBTD1Q05BQ5 628 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 MCL1Q07820 350 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 DGKDQ16760 1214 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 OLFML2BQ68BL8 750 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 TRAPPC11Q7Z392 1133 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 METTL13Q8N6R0 699 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 CCDC102AQ96A19 550 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 NLRP4Q96MN2 994 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 ZFYVE28Q9HCC9 887 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 PDE11AQ9HCR9 933 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 PTPRHQ9HD43 1115 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 A6NJR5 290 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 ZC3H11AO75152 810 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■■■■ 30.4
CCT4-201ENST00000394440 MOCS3O95396 460 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 C4BPAP04003 597 aaKnown RBP16.17■□□□□ 0.18
CCT4-201ENST00000394440 ATP1A1P05023 1023 aaKnown RBP16.17■□□□□ 0.18
CCT4-201ENST00000394440 SREBF2Q12772 1141 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 PRAMEF19Q5SWL8 479 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 ALKBH5Q6P6C2 394 aaKnown RBP16.17■□□□□ 0.18
CCT4-201ENST00000394440 VPS36Q86VN1 386 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 BRSK2Q8IWQ3 736 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 SHC3Q92529 594 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 FAM84AQ96KN4 292 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 IFT122Q9HBG6 1241 aa16.17■□□□□ 0.18
CCT4-201ENST00000394440 TACC1O75410 805 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 ECM2O94769 699 aaPredicted RBP16.16■□□□□ 0.18
CCT4-201ENST00000394440 TM4SF4P48230 202 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 CRHR2Q13324 411 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 CCL14Q16627 93 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 MTHFD1LQ6UB35 978 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 TSHZ1Q6ZSZ6 1077 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 SOCS4Q8WXH5 440 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 NT5C1BQ96P26 610 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 FNBP1Q96RU3 617 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 CGRRF1Q99675 332 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 MINDY3Q9H8M7 445 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 ENC1O14682 589 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 PRPF4BQ13523 1007 aaKnown RBP16.16■□□□□ 0.18
CCT4-201ENST00000394440 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 TDRD10Q5VZ19 366 aaKnown RBP16.16■□□□□ 0.18
CCT4-201ENST00000394440 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 MNS1Q8NEH6 495 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 APBA2Q99767 749 aa16.16■□□□□ 0.18
CCT4-201ENST00000394440 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCT4-201ENST00000394440 V9GYY5 206 aaPredicted RBP16.16■□□□□ 0.18
CCT4-201ENST00000394440 EFCAB8A8MWE9 144 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 OGTO15294 1046 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 IQCF3P0C7M6 154 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 HSPA1AP0DMV8 641 aaKnown RBP16.15■□□□□ 0.18
CCT4-201ENST00000394440 HSPA1BP0DMV9 641 aaKnown RBP16.15■□□□□ 0.18
CCT4-201ENST00000394440 RGS2P41220 211 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 MATR3P43243 847 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCT4-201ENST00000394440 FAM187BQ17R55 369 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 LMBRD2Q68DH5 695 aaPredicted RBP16.15■□□□□ 0.18
CCT4-201ENST00000394440 PPM1KQ8N3J5 372 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 ZNF668Q96K58 619 aaPredicted RBP16.15■□□□□ 0.18
CCT4-201ENST00000394440 ZIC5Q96T25 663 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 F2P00734 622 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 TNNI1P19237 187 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 CTGFP29279 349 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 CYP2C19P33261 490 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 TNFSF9P41273 254 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 MFAP3P55082 362 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 GCNT1Q02742 428 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 PPFIA1Q13136 1202 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 GRM1Q13255 1194 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 GRIK4Q16099 956 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 MPZL3Q6UWV2 235 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 GLYCTKQ8IVS8 523 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 CPSF3Q9UKF6 684 aaKnown RBP16.15■□□□□ 0.18
CCT4-201ENST00000394440 INTUQ9ULD6 942 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 JRKLQ9Y4A0 524 aa16.15■□□□□ 0.18
CCT4-201ENST00000394440 INO80B-WBP1J3KQ70 363 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 B4GALT5O43286 388 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 VNN1O95497 513 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 CYP2B6P20813 491 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 AMHR2Q16671 573 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 SEZ6Q53EL9 994 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 NOX5Q96PH1 765 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 ALS2CR12Q96Q35 445 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 INO80BQ9C086 356 aaPredicted RBP16.14■□□□□ 0.17
CCT4-201ENST00000394440 PRMT7Q9NVM4 692 aaPredicted RBP16.14■□□□□ 0.17
CCT4-201ENST00000394440 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
CCT4-201ENST00000394440 TNFSF13BQ9Y275 285 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms