RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CDT1Q9H211 546 aa33.75■■■□□ 2.99
CMTM4-202ENST00000394106 CXCL16Q9H2A7 254 aa33.75■■■□□ 2.99
CMTM4-202ENST00000394106 ZHX3Q9H4I2 956 aa33.75■■■□□ 2.99
CMTM4-202ENST00000394106 STK39Q9UEW8 545 aa33.75■■■□□ 2.99
CMTM4-202ENST00000394106 MORC2Q9Y6X9 1032 aaPredicted RBP33.75■■■□□ 2.99
CMTM4-202ENST00000394106 F8W810 466 aa33.74■■■□□ 2.99
CMTM4-202ENST00000394106 MAPTP10636 758 aaKnown RBP33.74■■■□□ 2.99
CMTM4-202ENST00000394106 FOXD4L6Q3SYB3 417 aaPredicted RBP33.74■■■□□ 2.99
CMTM4-202ENST00000394106 RRAGBQ5VZM2 374 aa33.74■■■□□ 2.99
CMTM4-202ENST00000394106 FOXD4L3Q6VB84 417 aaPredicted RBP33.74■■■□□ 2.99
CMTM4-202ENST00000394106 FAM178BQ8IXR5 827 aa33.74■■■□□ 2.99
CMTM4-202ENST00000394106 MYCT1Q8N699 235 aa33.74■■■□□ 2.99
CMTM4-202ENST00000394106 RABGGTAQ92696 567 aa33.74■■■□□ 2.99
CMTM4-202ENST00000394106 COLEC11Q9BWP8 271 aa33.74■■■□□ 2.99
CMTM4-202ENST00000394106 PTPRHQ9HD43 1115 aa33.74■■■□□ 2.99
CMTM4-202ENST00000394106 PTGESO14684 152 aa33.73■■■□□ 2.99
CMTM4-202ENST00000394106 CLASP2O75122 1294 aaKnown RBP33.73■■■□□ 2.99
CMTM4-202ENST00000394106 PDIA4P13667 645 aaKnown RBP33.73■■■□□ 2.99
CMTM4-202ENST00000394106 COASYQ13057 564 aa33.73■■■□□ 2.99
CMTM4-202ENST00000394106 GIT2Q14161 759 aa33.73■■■□□ 2.99
CMTM4-202ENST00000394106 LINC00301Q8NCQ3 95 aa33.73■■■□□ 2.99
CMTM4-202ENST00000394106 CACNG4Q9UBN1 327 aa33.73■■■□□ 2.99
CMTM4-202ENST00000394106 STK17AQ9UEE5 414 aa33.73■■■□□ 2.99
CMTM4-202ENST00000394106 TBCAO75347 108 aaKnown RBP33.72■■■□□ 2.99
CMTM4-202ENST00000394106 F13A1P00488 732 aa33.72■■■□□ 2.99
CMTM4-202ENST00000394106 THP07101 528 aa33.72■■■□□ 2.99
CMTM4-202ENST00000394106 HARSP12081 509 aaKnown RBP33.72■■■□□ 2.99
CMTM4-202ENST00000394106 NCKAP1LP55160 1127 aa33.72■■■□□ 2.99
CMTM4-202ENST00000394106 OSTNP61366 133 aa33.72■■■□□ 2.99
CMTM4-202ENST00000394106 KCNC3Q14003 757 aa33.72■■■□□ 2.99
CMTM4-202ENST00000394106 CEP120Q8N960 986 aa33.72■■■□□ 2.99
CMTM4-202ENST00000394106 PARVGQ9HBI0 331 aa33.72■■■□□ 2.99
CMTM4-202ENST00000394106 DAXXQ9UER7 740 aaPredicted RBP33.72■■■□□ 2.99
CMTM4-202ENST00000394106 H0YCG3 227 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 SPTLC2O15270 562 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 TUSC3Q13454 348 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 PTPN14Q15678 1187 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 MPZL3Q6UWV2 235 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 HAUS6Q7Z4H7 955 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 SMRP1Q8NCR6 262 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 CCDC94Q9BW85 323 aaPredicted RBP33.71■■■□□ 2.99
CMTM4-202ENST00000394106 PANK2Q9BZ23 570 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 ANKFY1Q9P2R3 1169 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 IRAK3Q9Y616 596 aa33.71■■■□□ 2.99
CMTM4-202ENST00000394106 CASTOR2A6NHX0 329 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 C2CD2LO14523 706 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 SOD2P04179 222 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 GRM5P41594 1212 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 PKP1Q13835 747 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 SMAD2Q15796 467 aaKnown RBP33.7■■■□□ 2.99
CMTM4-202ENST00000394106 TMEM184AQ6ZMB5 413 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 TAS1R1Q7RTX1 841 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 ZBTB45Q96K62 511 aaPredicted RBP33.7■■■□□ 2.99
CMTM4-202ENST00000394106 HERC2P3Q9BVR0 1158 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 HCFC2Q9Y5Z7 792 aa33.7■■■□□ 2.99
CMTM4-202ENST00000394106 K7ENM7 598 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 URODP06132 367 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 MCF2P10911 925 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 PROZP22891 400 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 SSTR3P32745 418 aaPredicted RBP33.69■■■□□ 2.98
CMTM4-202ENST00000394106 ZNF131P52739 623 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 YARSP54577 528 aaKnown RBP33.69■■■□□ 2.98
CMTM4-202ENST00000394106 GLRA4Q5JXX5 417 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 ANKRD54Q6NXT1 300 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 CASP10Q92851 521 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 BICD1Q96G01 975 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 PAAF1Q9BRP4 392 aa33.69■■■□□ 2.98
CMTM4-202ENST00000394106 MRPL17Q9NRX2 175 aaKnown RBP33.69■■■□□ 2.98
CMTM4-202ENST00000394106 ABLIM1O14639 778 aa33.68■■■□□ 2.98
CMTM4-202ENST00000394106 HSP90AA2PQ14568 343 aaPredicted RBP33.68■■■□□ 2.98
CMTM4-202ENST00000394106 CCDC73Q6ZRK6 1079 aa33.68■■■□□ 2.98
CMTM4-202ENST00000394106 DYMQ7RTS9 669 aa33.68■■■□□ 2.98
CMTM4-202ENST00000394106 APOL5Q9BWW9 433 aa33.68■■■□□ 2.98
CMTM4-202ENST00000394106 CD320Q9NPF0 282 aa33.68■■■□□ 2.98
CMTM4-202ENST00000394106 ADAM28Q9UKQ2 775 aa33.68■■■□□ 2.98
CMTM4-202ENST00000394106 TRAK2O60296 914 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 TOM1L1O75674 476 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 YEATS4O95619 227 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 STAT6P42226 847 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 MATR3P43243 847 aaKnown RBP eCLIP33.67■■■□□ 2.98
CMTM4-202ENST00000394106 ZPBP2Q6X784 338 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 SV2BQ7L1I2 683 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 GJD3Q8N144 294 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 EMILIN2Q9BXX0 1053 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 TOPORSQ9NS56 1045 aaPredicted RBP33.67■■■□□ 2.98
CMTM4-202ENST00000394106 PRKAG3Q9UGI9 489 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 USP15Q9Y4E8 981 aaPredicted RBP33.67■■■□□ 2.98
CMTM4-202ENST00000394106 TRIP11Q15643 1979 aa33.67■■■□□ 2.98
CMTM4-202ENST00000394106 A0A087X0B3 334 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 PPP6R2O75170 966 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 TADA2AO75478 443 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 GLUD2P49448 558 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 NOLC1Q14978 699 aaKnown RBP eCLIP33.66■■■□□ 2.98
CMTM4-202ENST00000394106 NAB2Q15742 525 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 KIAA1841Q6NSI8 718 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 FUT10Q6P4F1 479 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 PDILTQ8N807 584 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 HASPINQ8TF76 798 aa33.66■■■□□ 2.98
CMTM4-202ENST00000394106 BRD1O95696 1058 aa33.65■■■□□ 2.98
CMTM4-202ENST00000394106 EFEMP2O95967 443 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms