RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 MMTAG2Q9BU76 263 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 ADAM28Q9UKQ2 775 aa20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 SORCS3Q9UPU3 1222 aa20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 DOCK8Q8NF50 2099 aa20.14■□□□□ 0.81
PDLIM7-205ENST00000393551 E9PMD0 336 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 NR1I2O75469 434 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 RFPL2O75678 378 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 RECQL4O94761 1208 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 ADH1AP07327 375 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 SPATA31D3P0C874 917 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 LIG1P18858 919 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 IGFBP6P24592 240 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 TUSC3Q13454 348 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 RABEP1Q15276 862 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 C15orf39Q6ZRI6 1047 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 SPATA31D4Q6ZUB0 917 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 KCNK18Q7Z418 384 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 ZBTB33Q86T24 672 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 DAW1Q8N136 415 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 TDRD5Q8NAT2 981 aaKnown RBP20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 CMASQ8NFW8 434 aaPredicted RBP20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 DEPTORQ8TB45 409 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 SNX29Q8TEQ0 813 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 SSX2IPQ9Y2D8 614 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 DMDP11532 3685 aa20.13■□□□□ 0.81
PDLIM7-205ENST00000393551 CASTOR2A6NHX0 329 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 N4BP1O75113 896 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 PAPLNO95428 1278 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 GLUD1P00367 558 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 RPL17P18621 184 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 MTMR3Q13615 1198 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 HSP90AA2PQ14568 343 aaPredicted RBP20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 PPP2R5AQ15172 486 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 USP41Q3LFD5 358 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 RTP2Q5QGT7 225 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 LILRA6Q6PI73 481 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 ALYREFQ86V81 257 aaKnown RBP20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 HASPINQ8TF76 798 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 KIFAP3Q92845 792 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 TMX3Q96JJ7 454 aa20.12■□□□□ 0.81
PDLIM7-205ENST00000393551 CCDC195A0A1B0GUA6 201 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 TGM5O43548 720 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 KIF4AO95239 1232 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 PRSS55Q6UWB4 352 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 TAS1R3Q7RTX0 852 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 PALB2Q86YC2 1186 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 SUGP1Q8IWZ8 645 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 GPR65Q8IYL9 337 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 UBALD2Q8IYN6 164 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 RIN2Q8WYP3 895 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 ZNF707Q96C28 371 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 RUSC1Q9BVN2 902 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 GDAQ9Y2T3 454 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 VPS13AQ96RL7 3174 aa20.11■□□□□ 0.81
PDLIM7-205ENST00000393551 SPDYE4A6NLX3 237 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 LAD1O00515 517 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 TADA2AO75478 443 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 THP07101 528 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 AVPR2P30518 371 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 PRPHP41219 470 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 NPTX2P47972 431 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 EFNA5P52803 228 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 TCF15Q12870 199 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 MAPK7Q13164 816 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 CCDC149Q6ZUS6 474 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 GLYCTKQ8IVS8 523 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 PLCD3Q8N3E9 789 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 IFT74Q96LB3 600 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 PHOX2BQ99453 314 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 RHOBTB2Q9BYZ6 727 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 FNIP2Q9P278 1114 aa20.1■□□□□ 0.81
PDLIM7-205ENST00000393551 MYH11P35749 1972 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 HIP1RO75146 1068 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 PEX3P56589 373 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 TMEM132AQ24JP5 1023 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 ATF7IP2Q5U623 682 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 RINT1Q6NUQ1 792 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 C1orf186Q6ZWK4 172 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 CEP120Q8N960 986 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 ADPGKQ9BRR6 497 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 PTPRHQ9HD43 1115 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 WDR6Q9NNW5 1121 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 DNM3Q9UQ16 869 aa20.09■□□□□ 0.81
PDLIM7-205ENST00000393551 SF3B1O75533 1304 aaKnown RBP eCLIP20.08■□□□□ 0.814e-7■■■■■ 44.1
PDLIM7-205ENST00000393551 K7ERI5 159 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 C1RP00736 705 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 ATP2C1P98194 919 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 DCAF4L1Q3SXM0 396 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 GLRA4Q5JXX5 417 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 FAM171A1Q5VUB5 890 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 KRT79Q5XKE5 535 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 MCTP1Q6DN14 999 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 DTHD1Q6ZMT9 781 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 OTOP3Q7RTS5 596 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 LNX1Q8TBB1 728 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 HDAC7Q8WUI4 952 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 PNMA5Q96PV4 448 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 PPP1R10Q96QC0 940 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms