RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KATNAL1Q9BW62 490 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 RNF186Q9NXI6 227 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 REXO2Q9Y3B8 237 aaKnown RBP9.36□□□□□ -0.91
TDP1-203ENST00000393454 PAXBP1Q9Y5B6 917 aa9.36□□□□□ -0.91
TDP1-203ENST00000393454 SSU72P8A0A1W2PR75 194 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 MYADML2A6NDP7 307 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 OGTO15294 1046 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 KIF5CO60282 957 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 PGK1P00558 417 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 IQCF3P0C7M6 154 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 PNMA6AP0CW24 399 aaPredicted RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 RARBP10826 455 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 FERP16591 822 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 HOXD10P28358 340 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 TNFSF9P41273 254 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 GPC3P51654 580 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 JAM2P57087 298 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 OSTNP61366 133 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 CAP1Q01518 475 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 GFPT1Q06210 699 aaPredicted RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 POU5F1BQ06416 359 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 MCL1Q07820 350 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 CACNB2Q08289 660 aaPredicted RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 MAPK8IP2Q13387 824 aaPredicted RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 KIZQ2M2Z5 673 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 SV2AQ7L0J3 742 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 ARHGEF19Q8IW93 802 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 C7orf31Q8N865 590 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 TAS1R2Q8TE23 839 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 SEMA4DQ92854 862 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 CPB2Q96IY4 423 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 NFKBIZQ9BYH8 718 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 HAUS4Q9H6D7 363 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 RAB20Q9NX57 234 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 GUCA1BQ9UMX6 200 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 BZW2Q9Y6E2 419 aaKnown RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 C17orf102A2RUQ5 167 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 F8VZ95 297 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 PMM2O15305 246 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 PHACTR2O75167 634 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 ERLIN2O94905 339 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 RFX1P22670 979 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 CASQ1P31415 396 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 SOX5P35711 763 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 USP8P40818 1118 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 VEGFBP49765 207 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 WNT7BP56706 349 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 HTRA3P83110 453 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 PURAQ00577 322 aaKnown RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 ENPEPQ07075 957 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 CCDC122Q5T0U0 273 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 EEF1DP3Q658K8 133 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 RUFY4Q6ZNE9 571 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 IRF2BP2Q7Z5L9 587 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 ZNF410Q86VK4 478 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 PPM1KQ8N3J5 372 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 ZNF516Q92618 1163 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 JAKMIP2Q96AA8 810 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 NT5C1BQ96P26 610 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 IFIH1Q9BYX4 1025 aaKnown RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 IRX2Q9BZI1 471 aaPredicted RBP9.35□□□□□ -0.91
TDP1-203ENST00000393454 TFR2Q9UP52 801 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 DAAM1Q9Y4D1 1078 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 PCDHA13Q9Y5I0 950 aa9.35□□□□□ -0.91
TDP1-203ENST00000393454 SMIM35A0A1B0GVV1 85 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 HAS3O00219 553 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 SEPT4O43236 478 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 TREHO43280 583 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 KPNA6O60684 536 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 ABL1P00519 1130 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 GNAT1P11488 350 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
TDP1-203ENST00000393454 CCND3P30281 292 aaPredicted RBP9.34□□□□□ -0.91
TDP1-203ENST00000393454 MAP2K2P36507 400 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 ARHGAP25P42331 645 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 PIK3CAP42336 1068 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 MAGEA1P43355 309 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 GJA9P57773 515 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 ZNF200P98182 395 aaPredicted RBP9.34□□□□□ -0.91
TDP1-203ENST00000393454 PTK2Q05397 1052 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 KIF5AQ12840 1032 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 FAM187BQ17R55 369 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 ZNF569Q5MCW4 686 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 SRGAP1Q7Z6B7 1085 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 VPS36Q86VN1 386 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 IFNLR1Q8IU57 520 aaPredicted RBP9.34□□□□□ -0.91
TDP1-203ENST00000393454 RAET1EQ8TD07 263 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 DNAJB3Q8WWF6 145 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 ELMO3Q96BJ8 720 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 CGRRF1Q99675 332 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
TDP1-203ENST00000393454 PI4K2AQ9BTU6 479 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 HDAC6Q9UBN7 1215 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 TRIM10Q9UDY6 481 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 SRRDQ9UH36 339 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 TNFSF13BQ9Y275 285 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
TDP1-203ENST00000393454 TRIP12Q14669 1992 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms