RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 EMC10Q5UCC4 262 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 BARGINQ6ZT62 677 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 H2AFVQ71UI9 128 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 CELF4Q9BZC1 486 aaKnown RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 GIN1Q9NXP7 522 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 PPARGC1AQ9UBK2 798 aaKnown RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 GDAQ9Y2T3 454 aa8.09□□□□□ -1.11
VTI1A-201ENST00000393077 SRPRBQ9Y5M8 271 aaKnown RBP8.09□□□□□ -1.11
VTI1A-201ENST00000393077 GPAA1O43292 621 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 AFPP02771 609 aaKnown RBP8.09□□□□□ -1.12
VTI1A-201ENST00000393077 ENO2P09104 434 aaPredicted RBP8.09□□□□□ -1.12
VTI1A-201ENST00000393077 PLCG2P16885 1265 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 HSPA1LP34931 641 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 ACADVLP49748 655 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 GEMIN4P57678 1058 aaKnown RBP8.09□□□□□ -1.12
VTI1A-201ENST00000393077 POLR2FP61218 127 aaKnown RBP8.09□□□□□ -1.12
VTI1A-201ENST00000393077 PLEKHA7Q6IQ23 1121 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 SMIM5Q71RC9 77 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 TAS2R42Q7RTR8 314 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 GSTA5Q7RTV2 222 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 NLRP10Q86W26 655 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 ADSSL1Q8N142 457 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 JDP2Q8WYK2 163 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 CCDC124Q96CT7 223 aaKnown RBP8.09□□□□□ -1.12
VTI1A-201ENST00000393077 GPATCH1Q9BRR8 931 aaKnown RBP8.09□□□□□ -1.12
VTI1A-201ENST00000393077 SENP2Q9HC62 589 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 SEC31BQ9NQW1 1179 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 EPS15L1Q9UBC2 864 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 REXO2Q9Y3B8 237 aaKnown RBP8.09□□□□□ -1.12
VTI1A-201ENST00000393077 CEMIPQ8WUJ3 1361 aa8.09□□□□□ -1.12
VTI1A-201ENST00000393077 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 HSPA1AP0DMV8 641 aaKnown RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 HSPA1BP0DMV9 641 aaKnown RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 IL6STP40189 918 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 RNF43Q68DV7 783 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 TUBA3EQ6PEY2 450 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 PALB2Q86YC2 1186 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 TREML1Q86YW5 311 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 NUP93Q8N1F7 819 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 FNDC8Q8TC99 324 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 OSCP1Q8WVF1 389 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 HPS3Q969F9 1004 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 CNBD2Q96M20 576 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 PHF12Q96QT6 1004 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 RIOK1Q9BRS2 568 aaKnown RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 DSCC1Q9BVC3 393 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 TLR10Q9BXR5 811 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 KLHL4Q9C0H6 718 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 NYXQ9GZU5 481 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 VPS37BQ9H9H4 285 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 PHTF1Q9UMS5 762 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 MAD1L1Q9Y6D9 718 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 CPA2P48052 419 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 TMTC4Q5T4D3 741 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 CDKAL1Q5VV42 579 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 METTL21CQ5VZV1 264 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 LRRC6Q86X45 466 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 SFR1Q86XK3 245 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 ERLEC1Q96DZ1 483 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 MAGEB18Q96M61 343 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 BTBD10Q9BSF8 475 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 MYL10Q9BUA6 226 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 APPL1Q9UKG1 709 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 DMTF1Q9Y222 760 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 HEY1Q9Y5J3 304 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 GOLGA8IPA6NC78 632 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 LRRC53A6NM62 1247 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 A8MXQ7 604 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 TRAF5O00463 557 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 KPNA4O00629 521 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 MMP13P45452 471 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 RAB15P59190 212 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 ADAM17P78536 824 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 KDSRQ06136 332 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 PDK3Q15120 406 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 CNGA2Q16280 664 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 RGS21Q2M5E4 152 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 CMPK2Q5EBM0 449 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 USPL1Q5W0Q7 1092 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 RNF19BQ6ZMZ0 732 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 MTDHQ86UE4 582 aaKnown RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 EIF1ADQ8N9N8 165 aaKnown RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 SLC43A3Q8NBI5 491 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 MAML1Q92585 1016 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 CDHR1Q96JP9 859 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 RNF41Q9H4P4 317 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 CAAP1Q9H8G2 361 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 ARMT1Q9H993 441 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 STX18Q9P2W9 335 aaKnown RBP8.08□□□□□ -1.12
VTI1A-201ENST00000393077 DAPK2Q9UIK4 370 aa8.08□□□□□ -1.12
VTI1A-201ENST00000393077 H3BRJ5 948 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 PLEKP08567 350 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-201ENST00000393077 VDRP11473 427 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 CYP2C9P11712 490 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 KRT3P12035 628 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 BMP6P22004 513 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 IFNA8P32881 189 aa8.07□□□□□ -1.12
VTI1A-201ENST00000393077 CIITAP33076 1130 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms