RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 L2HGDHQ9H9P8 463 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 FAM8A1Q9UBU6 413 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 NRKQ7Z2Y5 1582 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 PLEKHG2Q9H7P9 1386 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 RAD51CO43502 376 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 EFTUD2Q15029 972 aaKnown RBP eCLIP13.89□□□□□ -0.19
LCA5-202ENST00000392959 RFX8Q6ZV50 586 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 CEP19Q96LK0 163 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 LRFN2Q9ULH4 789 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 PCDHA10Q9Y5I2 948 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 ABCC3O15438 1527 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 PITPNM2Q9BZ72 1349 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 SERPINB4P48594 390 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 MMGT1Q8N4V1 131 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 KIF9Q9HAQ2 790 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 SNX5Q9Y5X3 404 aa13.89□□□□□ -0.19
LCA5-202ENST00000392959 SETD1BQ9UPS6 1966 aaKnown RBP13.88□□□□□ -0.19
LCA5-202ENST00000392959 GOLGA8RI6L899 631 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 AP3M2P53677 418 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 ANKMY2Q8IV38 441 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 TTLL6Q8N841 843 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 BEST2Q8NFU1 509 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 SEC16BQ96JE7 1060 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 IREB2P48200 963 aaKnown RBP13.88□□□□□ -0.19
LCA5-202ENST00000392959 EIF3EP60228 445 aaKnown RBP13.88□□□□□ -0.19
LCA5-202ENST00000392959 GPSM2P81274 684 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 LONRF1Q17RB8 773 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 GRAMD4Q6IC98 578 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 ANKS1AQ92625 1134 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 BEGAINQ9BUH8 593 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 CRB1P82279 1406 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 A0A1W2PQJ5 194 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 SYCE1LA8MT33 242 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 SNX2O60749 519 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 SEC24CP53992 1094 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 HIC1Q14526 733 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 SBK1Q52WX2 424 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 FAM217BQ9NTX9 383 aaPredicted RBP13.88□□□□□ -0.19
LCA5-202ENST00000392959 ABCF3Q9NUQ8 709 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 MTMR4Q9NYA4 1195 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 ZFATQ9P243 1243 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 F5H423 210 aaPredicted RBP13.88□□□□□ -0.19
LCA5-202ENST00000392959 H3BRJ5 948 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 SLC9A1P19634 815 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 RARS2Q5T160 578 aaKnown RBP13.88□□□□□ -0.19
LCA5-202ENST00000392959 ITPRIPL1Q6GPH6 555 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 C1orf228Q6PIY5 440 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 JAMLQ86YT9 394 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 AGGF1Q8N302 714 aaeCLIP13.88□□□□□ -0.19
LCA5-202ENST00000392959 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
LCA5-202ENST00000392959 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
LCA5-202ENST00000392959 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 ZFXP17010 805 aaPredicted RBP13.87□□□□□ -0.19
LCA5-202ENST00000392959 KLRC1P26715 233 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 KDSRQ06136 332 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 EFHC2Q5JST6 749 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 LMBRD2Q68DH5 695 aaPredicted RBP13.87□□□□□ -0.19
LCA5-202ENST00000392959 REXO1L1PQ8IX06 675 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 SLC30A5Q8TAD4 765 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 CYFIP2Q96F07 1278 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 REEP2Q9BRK0 252 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 ADAM33Q9BZ11 813 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 PDS5AQ29RF7 1337 aaKnown RBP13.87□□□□□ -0.19
LCA5-202ENST00000392959 F8W8V4 182 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 C21orf2O43822 256 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 BNIP3LO60238 219 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 AP1B1Q10567 949 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 SPP2Q13103 211 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 ANGPTL8Q6UXH0 198 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 LRRC31Q6UY01 552 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 ELOA2Q8IYF1 753 aaPredicted RBP13.87□□□□□ -0.19
LCA5-202ENST00000392959 FAM47DPA6NHR8 397 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 NSUN2Q08J23 767 aaKnown RBP eCLIP13.87□□□□□ -0.19
LCA5-202ENST00000392959 GPR162Q16538 588 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 P3H1Q32P28 736 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 SLC10A5Q5PT55 438 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 FRA10AC1Q70Z53 315 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 TRPM8Q7Z2W7 1104 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 PID1Q7Z2X4 250 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 RASSF3Q86WH2 238 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 DDX42Q86XP3 938 aaKnown RBP eCLIP13.87□□□□□ -0.19
LCA5-202ENST00000392959 RCOR2Q8IZ40 523 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 USP38Q8NB14 1042 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 ALKBH8Q96BT7 664 aaKnown RBP13.87□□□□□ -0.19
LCA5-202ENST00000392959 ERGIC2Q96RQ1 377 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 RANBP17Q9H2T7 1088 aaKnown RBP13.87□□□□□ -0.19
LCA5-202ENST00000392959 BATF3Q9NR55 127 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 HSPBP1Q9NZL4 362 aa13.87□□□□□ -0.19
LCA5-202ENST00000392959 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 FAM107AO95990 144 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 CUL3Q13618 768 aa13.86□□□□□ -0.19
LCA5-202ENST00000392959 LDHDQ86WU2 507 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms