RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 IYDQ6PHW0 289 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 ENOSF1Q7L5Y1 443 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 P3H2Q8IVL5 708 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 P2RX5Q93086 422 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 EVPLLA8MZ36 301 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 H3BMM5 538 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 SHROOM1Q2M3G4 852 aaPredicted RBP15.53■□□□□ 0.08
CCDC50-201ENST00000392455 SCARA5Q6ZMJ2 495 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 TMC4Q7Z404 712 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 DDHD1Q8NEL9 900 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 VPS33AQ96AX1 596 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 OSBPL1AQ9BXW6 950 aa15.53■□□□□ 0.08
CCDC50-201ENST00000392455 ARFIP2P53365 341 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 EPS8Q12929 822 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 OLFML2BQ68BL8 750 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 PZPP20742 1482 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 MLNP12872 115 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 CCDC130P13994 396 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 CD58P19256 250 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 TBL3Q12788 808 aaKnown RBP15.52■□□□□ 0.08
CCDC50-201ENST00000392455 ILF2Q12905 390 aaKnown RBP15.52■□□□□ 0.08
CCDC50-201ENST00000392455 BBS9Q3SYG4 887 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 DPP10Q8N608 796 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 KRT35Q92764 455 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 EME1Q96AY2 570 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 HEXIM2Q96MH2 286 aaKnown RBP15.52■□□□□ 0.08
CCDC50-201ENST00000392455 ZMYND10O75800 440 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 CIAO1O76071 339 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 THEMIS2Q5TEJ8 643 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 PEG10Q86TG7 708 aaKnown RBP15.52■□□□□ 0.08
CCDC50-201ENST00000392455 OSCP1Q8WVF1 389 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 ANKRD27Q96NW4 1050 aa15.52■□□□□ 0.08
CCDC50-201ENST00000392455 TGS1Q96RS0 853 aaKnown RBP15.52■□□□□ 0.08
CCDC50-201ENST00000392455 PSAPP07602 524 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 TSEN34Q9BSV6 310 aaKnown RBP15.52■□□□□ 0.07
CCDC50-201ENST00000392455 SLITRK6Q9H5Y7 841 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 CYTH3O43739 400 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 ACSL3O95573 720 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 ARL4DP49703 201 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 ANKRD49Q8WVL7 239 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 PNMA8CA0A1B0GUJ8 204 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 HIST1H2AGP0C0S8 130 aaPredicted RBP15.52■□□□□ 0.07
CCDC50-201ENST00000392455 HIST1H2ADP20671 130 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 NPEPPSP55786 919 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 PTPN21Q16825 1174 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 ESRP1Q6NXG1 681 aaKnown RBP15.52■□□□□ 0.07
CCDC50-201ENST00000392455 CDKL3Q8IVW4 592 aaPredicted RBP15.52■□□□□ 0.07
CCDC50-201ENST00000392455 NLGN1Q8N2Q7 840 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 HIST1H2AHQ96KK5 128 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 HIST1H2AJQ99878 128 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 H2AFJQ9BTM1 129 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 ABCC2Q92887 1545 aa15.52■□□□□ 0.07
CCDC50-201ENST00000392455 CASP8Q14790 479 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 HEATR6Q6AI08 1181 aaKnown RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 COA7Q96BR5 231 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 THOC1Q96FV9 657 aaKnown RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 DTNAQ9Y4J8 743 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 PDZK1P1A8MUH7 402 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 ABCB1P08183 1280 aaPredicted RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 HSPH1Q92598 858 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 GINM1Q9NU53 330 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 NPC1L1Q9UHC9 1359 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 PEX1O43933 1283 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 CLASP2O75122 1294 aaKnown RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 TRIM49P0CI25 452 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 TRIM49CP0CI26 452 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 BMP3P12645 472 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 RPL19P84098 196 aaKnown RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 FOXD4Q12950 439 aaPredicted RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 PIGSQ96S52 555 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 ARMC7Q9H6L4 198 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 QTRT2Q9H974 415 aaKnown RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 SP110Q9HB58 689 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 ADGRA3Q8IWK6 1321 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 SMAPO00193 183 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 DPYSL4O14531 572 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 KCNA2P16389 499 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 PPP2R2AP63151 447 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 PKP1Q13835 747 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 DDIASQ8IXT1 998 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 GRAMD1CQ8IYS0 662 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 FAM161BQ96MY7 647 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 RNF26Q9BY78 433 aaPredicted RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 GALNT8Q9NY28 637 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 NOVA2Q9UNW9 492 aaKnown RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 SDE2Q6IQ49 451 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 MIGA2Q7L4E1 593 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 AGGF1Q8N302 714 aaeCLIP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 SP100P23497 879 aaPredicted RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 RGS4P49798 205 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 P3H1Q32P28 736 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 EXT2Q93063 718 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 BBS2Q9BXC9 721 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 NEK6Q9HC98 313 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 RNF103O00237 685 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 BMP10O95393 424 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 CHRNA3P32297 505 aa15.51■□□□□ 0.07
CCDC50-201ENST00000392455 USP13Q92995 863 aaPredicted RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 SPRTNQ9H040 489 aaPredicted RBP15.51■□□□□ 0.07
CCDC50-201ENST00000392455 TLR7Q9NYK1 1049 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms