RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 CDHR1Q96JP9 859 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 SPATA31D1Q6ZQQ2 1576 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 JAK3P52333 1124 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 PSMC1P62191 440 aaKnown RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 CAV1Q03135 178 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 ASPHQ12797 758 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 DNAJC3Q13217 504 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 ZNF667Q5HYK9 610 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 SLC20A1Q8WUM9 679 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 CCT6BQ92526 530 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 ACSF2Q96CM8 615 aaPredicted RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 CBWD1Q9BRT8 395 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 ATP6V0A4Q9HBG4 840 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 NYAP2Q9P242 653 aa13.78□□□□□ -0.2
PCNX4-202ENST00000391611 AGO2Q9UKV8 859 aaKnown RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
PCNX4-202ENST00000391611 TBX3O15119 743 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 KRT37O76014 449 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 SGPL1O95470 568 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 CHRNA5P30532 468 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 ECE1P42892 770 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 ARFIP2P53365 341 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 KCNA1Q09470 495 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 TRADDQ15628 312 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 MCUQ8NE86 351 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 TMEM143Q96AN5 459 aa13.77□□□□□ -0.2
PCNX4-202ENST00000391611 RTFDC1Q9BY42 306 aaPredicted RBP13.77□□□□□ -0.2
PCNX4-202ENST00000391611 CFAP73A6NFT4 308 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 ZBTB39O15060 712 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 MAP3K7O43318 606 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 TRPA1O75762 1119 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 KRT76Q01546 638 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 CDR2Q01850 454 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 KIF22Q14807 665 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 RPS6KA2Q15349 733 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 GRAMD1BQ3KR37 738 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 SLFN12LQ6IEE8 588 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 CCDC125Q86Z20 511 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 OSBPL8Q9BZF1 889 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 POLR3FQ9H1D9 316 aaPredicted RBP13.77□□□□□ -0.21
PCNX4-202ENST00000391611 POLLQ9UGP5 575 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 ELF1P32519 619 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 COILP38432 576 aaPredicted RBP13.77□□□□□ -0.21
PCNX4-202ENST00000391611 COG7P83436 770 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 SLC13A5Q86YT5 568 aaPredicted RBP13.77□□□□□ -0.21
PCNX4-202ENST00000391611 SPATA20Q8TB22 786 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 POP1Q99575 1024 aaKnown RBP13.77□□□□□ -0.21
PCNX4-202ENST00000391611 TRAIPQ9BWF2 469 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 NPHS2Q9NP85 383 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 PPP1R9AQ9ULJ8 1098 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 SIK3Q9Y2K2 1263 aa13.77□□□□□ -0.21
PCNX4-202ENST00000391611 IGF2BP3O00425 579 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCNX4-202ENST00000391611 GPC4O75487 556 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 DRP2Q13474 957 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 GPD1LQ8N335 351 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 ACER1Q8TDN7 264 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 FAM161BQ96MY7 647 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 OSBPL1AQ9BXW6 950 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 MIS12Q9H081 205 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 RIOX1Q9H6W3 641 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 ZHX2Q9Y6X8 837 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 GGPS1O95749 300 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 ITIH2P19823 946 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 AMPD2Q01433 879 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 Q3C1V9 767 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 MIIPQ5JXC2 388 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 CAVIN3Q969G5 261 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 MED15Q96RN5 788 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 ZNF277Q9NRM2 450 aaPredicted RBP13.76□□□□□ -0.21
PCNX4-202ENST00000391611 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 NEU2Q9Y3R4 380 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 UBE4BO95155 1302 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 RIMS1Q86UR5 1692 aaKnown RBP13.76□□□□□ -0.21
PCNX4-202ENST00000391611 RALAP11233 206 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 RFX1P22670 979 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 TTMPQ5BVD1 217 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 TRMT10CQ7L0Y3 403 aaKnown RBP13.76□□□□□ -0.21
PCNX4-202ENST00000391611 CBWD2Q8IUF1 395 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 RPF1Q9H9Y2 349 aaKnown RBP13.76□□□□□ -0.21
PCNX4-202ENST00000391611 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 UVRAGQ9P2Y5 699 aa13.76□□□□□ -0.21
PCNX4-202ENST00000391611 MARCOQ9UEW3 520 aaPredicted RBP13.76□□□□□ -0.21
PCNX4-202ENST00000391611 MED7O43513 233 aa13.75□□□□□ -0.21
PCNX4-202ENST00000391611 PBX1P40424 430 aa13.75□□□□□ -0.21
PCNX4-202ENST00000391611 AARSP49588 968 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCNX4-202ENST00000391611 ITKQ08881 620 aa13.75□□□□□ -0.21
PCNX4-202ENST00000391611 STAT4Q14765 748 aa13.75□□□□□ -0.21
PCNX4-202ENST00000391611 MMEL1Q495T6 779 aa13.75□□□□□ -0.21
PCNX4-202ENST00000391611 C1orf228Q6PIY5 440 aa13.75□□□□□ -0.21
PCNX4-202ENST00000391611 CRLF3Q8IUI8 442 aa13.75□□□□□ -0.21
PCNX4-202ENST00000391611 MORC4Q8TE76 937 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms