RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 MXRA8Q9BRK3 442 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.97■□□□□ 0.634e-7■■■■□ 22.8
SQSTM1-202ENST00000389805 FEM1BQ9UK73 627 aa18.97■□□□□ 0.63
SQSTM1-202ENST00000389805 ARHGEF35A5YM69 484 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 EIF3DO15371 548 aaKnown RBP eCLIP18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 PDHA1P08559 390 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 ALAS1P13196 640 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 CXCL9Q07325 125 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 CNGA2Q16280 664 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 DCAF12L1Q5VU92 463 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 B3GNT9Q6UX72 402 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 FITM2Q8N6M3 262 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 RAVER2Q9HCJ3 691 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 AMFRQ9UKV5 643 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 COL2A1P02458 1487 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 FRMPD4Q14CM0 1322 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 FMO5P49326 533 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 PDE6CP51160 858 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 MAPK7Q13164 816 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 DUPD1Q68J44 220 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 RTKN2Q8IZC4 609 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 SYCP3Q8IZU3 236 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 ZSWIM2Q8NEG5 633 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 TMOD4Q9NZQ9 345 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 SUCLA2Q9P2R7 463 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 STXBP5LQ9Y2K9 1186 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 PTGER2P43116 358 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 LACTBP83111 547 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 ATP11AP98196 1134 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 TRAF1Q13077 416 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 FAM160B2Q86V87 743 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 C18orf8Q96DM3 657 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 CAMKK2Q96RR4 588 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 NKX1-2Q9UD57 310 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 PGAP2Q9UHJ9 254 aa18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 ZMYND8Q9ULU4 1186 aaPredicted RBP18.96■□□□□ 0.63
SQSTM1-202ENST00000389805 RPTORQ8N122 1335 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 FLOT1O75955 427 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 NUDT17P0C025 328 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 ZNF131P52739 623 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 DLG4P78352 724 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 PADI6Q6TGC4 694 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 ZDHHC24Q6UX98 284 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 HS2ST1Q7LGA3 356 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 JAMLQ86YT9 394 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 GLYCTKQ8IVS8 523 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 ZFATQ9P243 1243 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 DNAJC12Q9UKB3 198 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 KLHL33A6NCF5 533 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 CTCFP49711 727 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 GALCP54803 685 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 BNIP1Q12981 228 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 RASA3Q14644 834 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 DRAP1Q14919 205 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 ARHGAP44Q17R89 818 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 LONRF1Q17RB8 773 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 MIER3Q7Z3K6 550 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 CLEC4DQ8WXI8 215 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 NAF1Q96HR8 494 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 RMDN2Q96LZ7 410 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 KCNK9Q9NPC2 374 aa18.95■□□□□ 0.62
SQSTM1-202ENST00000389805 DPPA5A6NC42 116 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 BTNL10A8MVZ5 291 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 RASGRF2O14827 1237 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 MAP3K13O43283 966 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 EXOC3O60645 756 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 SUN1O94901 812 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 SNUPNO95149 360 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 PRKCIP41743 596 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 LLGL1Q15334 1064 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 FAM43BQ6ZT52 329 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 LNX1Q8TBB1 728 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 HES6Q96HZ4 224 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 ETAA1Q9NY74 926 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 BZW2Q9Y6E2 419 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 ATAD5Q96QE3 1844 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 DHX15O43143 795 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 ASNSP08243 561 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 EIF2AK2P19525 551 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 ATP4AP20648 1035 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 MRPS9P82933 396 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 SPP2Q13103 211 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 SLMAPQ14BN4 828 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 C6orf118Q5T5N4 469 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 EHMT1Q9H9B1 1298 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 CPSF2Q9P2I0 782 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 ZNRF3Q9ULT6 936 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 FRMD4BQ9Y2L6 1034 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 ZHX2Q9Y6X8 837 aa18.94■□□□□ 0.62
SQSTM1-202ENST00000389805 TBC1D12O60347 775 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 AGTP01019 485 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 ICAM1P05362 532 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 PTENP60484 403 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 RBBP5Q15291 538 aaKnown RBP18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 GALNTL6Q49A17 601 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 EXOC3L1Q86VI1 746 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 DMAC2Q9NW81 257 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 K7ENM7 598 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 TUBP50607 506 aa18.93■□□□□ 0.62
SQSTM1-202ENST00000389805 HSD17B4P51659 736 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms