RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 RRN3P2A6NIE6 340 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 EIF3DO15371 548 aaKnown RBP eCLIP13.8□□□□□ -0.29e-7■■■□□ 16.3
PTPRN2-203ENST00000389418 FTLP02792 175 aaPredicted RBP13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 RBP5P82980 135 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 CCZ1BP86790 482 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 NR1H3Q13133 447 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 NAA25Q14CX7 972 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 SYCP2LQ5T4T6 812 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 TUBB6Q9BUF5 446 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 TARS2Q9BW92 718 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 MOV10L1Q9BXT6 1211 aaKnown RBP13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 LMCD1Q9NZU5 365 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 USP20Q9Y2K6 914 aa13.8□□□□□ -0.2
PTPRN2-203ENST00000389418 HBP1O60381 514 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 CPB1P15086 417 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 PSMC1P62191 440 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 RHOT1Q8IXI2 618 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 ZNF564Q8TBZ8 553 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 AFG1LQ8WV93 481 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 RFFLQ8WZ73 363 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 OSBPL9Q96SU4 736 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 AGPAT5Q9NUQ2 364 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 BAG5Q9UL15 447 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 HPCAL4Q9UM19 191 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 ESYT3A0FGR9 886 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 CREB3O43889 395 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 RGS7P49802 495 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 VEPH1Q14D04 833 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 KLC3Q6P597 504 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 SLC30A5Q8TAD4 765 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 GDAP1Q8TB36 358 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 RSPH10B2B2RC85 870 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 RSPH10BP0C881 870 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 CYP2C8P10632 490 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 NME3Q13232 169 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 LAMC2Q13753 1193 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 PDXDC1Q6P996 788 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 ATP6V1E2Q96A05 226 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 TRPV6Q9H1D0 765 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 ERAP1Q9NZ08 941 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 AGAP1Q9UPQ3 857 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 GOLGA8MH3BSY2 632 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 P4HA2O15460 535 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 ACSL3O95573 720 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 RPLP2P05387 115 aaKnown RBP13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 ARP10275 920 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 CA4P22748 312 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 SOX10P56693 466 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 IFT88Q13099 833 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 MTM1Q13496 603 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 TMED2Q15363 201 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 RNF219Q5W0B1 726 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 POLR3CQ9BUI4 534 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 PPP1R12CQ9BZL4 782 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 KLHL11Q9NVR0 708 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 KLK14Q9P0G3 267 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 SALL1Q9NSC2 1324 aa13.79□□□□□ -0.2
PTPRN2-203ENST00000389418 FOXP2O15409 715 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CYP26A1O43174 497 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 ICAM1P05362 532 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 VCAM1P19320 739 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 PMLP29590 882 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 PTPAQ15257 358 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 PAN2Q504Q3 1202 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 EFHC2Q5JST6 749 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 GANCQ8TET4 914 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 FIS1Q9Y3D6 152 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CASQ2O14958 399 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 IL18RAPO95256 599 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CYP2C9P11712 490 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CHRNA3P32297 505 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 SLC1A1P43005 524 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 GYS2P54840 703 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 NR1I3Q14994 352 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 DBN1Q16643 649 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 TADA2BQ86TJ2 420 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 GSPT2Q8IYD1 628 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CCDC197Q8NCU1 140 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 GBA2Q9HCG7 927 aaPredicted RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 EHD2Q9NZN4 543 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 ARHGAP42A6NI28 874 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 GRAP2O75791 330 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CD4P01730 458 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 PAPOLAP51003 745 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CLCN3P51790 818 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 CCDC38Q502W7 563 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 VCX3AQ9NNX9 186 aa13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 ADARB2Q9NS39 739 aaKnown RBP13.78□□□□□ -0.2
PTPRN2-203ENST00000389418 SSU72P8A0A1W2PR75 194 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms