RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 PSMD5Q16401 504 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 CSRP2Q16527 193 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 AASDHQ4L235 1098 aaPredicted RBP10.76□□□□□ -0.69
IFT88-203ENST00000389373 PABPC1LQ4VXU2 614 aaKnown RBP10.76□□□□□ -0.69
IFT88-203ENST00000389373 AXDND1Q5T1B0 1012 aaPredicted RBP10.76□□□□□ -0.69
IFT88-203ENST00000389373 FAM171A1Q5VUB5 890 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 TANGO2Q6ICL3 276 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 NPAS3Q8IXF0 933 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 HACE1Q8IYU2 909 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 BICD2Q8TD16 824 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 CLSTN3Q9BQT9 956 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 TTPALQ9BTX7 342 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 SLKQ9H2G2 1235 aaPredicted RBP10.76□□□□□ -0.69
IFT88-203ENST00000389373 BRD9Q9H8M2 597 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 GIT1Q9Y2X7 761 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 GPR179Q6PRD1 2367 aa10.76□□□□□ -0.69
IFT88-203ENST00000389373 EPG5Q9HCE0 2579 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 WDR87Q6ZQQ6 2873 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 CACNA1GO43497 2377 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 PATJQ8NI35 1801 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 CHURC1-FNTBB4DL54 471 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 INO80B-WBP1J3KQ70 363 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 ADAM12O43184 909 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 HRO43593 1189 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 LRP3O75074 770 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 HOXB3P14651 431 aaPredicted RBP10.75□□□□□ -0.69
IFT88-203ENST00000389373 FNTBP49356 437 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 USP11P51784 963 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 FGD1P98174 961 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 HEATR6Q6AI08 1181 aaKnown RBP10.75□□□□□ -0.69
IFT88-203ENST00000389373 NOTUMQ6P988 496 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 CEP68Q76N32 757 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 CDR2LQ86X02 465 aaPredicted RBP10.75□□□□□ -0.69
IFT88-203ENST00000389373 GPR65Q8IYL9 337 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 TBCKQ8TEA7 893 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 DDX1Q92499 740 aaKnown RBP10.75□□□□□ -0.69
IFT88-203ENST00000389373 FAM3CQ92520 227 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 PAAF1Q9BRP4 392 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 CSRNP2Q9H175 543 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 CHRDQ9H2X0 955 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 NXF3Q9H4D5 531 aaKnown RBP10.75□□□□□ -0.69
IFT88-203ENST00000389373 ANO2Q9NQ90 1003 aa10.75□□□□□ -0.69
IFT88-203ENST00000389373 SF3B1O75533 1304 aaKnown RBP eCLIP10.75□□□□□ -0.69
IFT88-203ENST00000389373 CASTOR2A6NHX0 329 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 MAN2B1O00754 1011 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 AXIN1O15169 862 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 TSPAN1O60635 241 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 ECI2O75521 394 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 NPTXRO95502 500 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 TDP2O95551 362 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 PMLP29590 882 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 AXLP30530 894 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 CXCL12P48061 93 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 CCR3P51677 355 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 NLRP5P59047 1200 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 EXOSC10Q01780 885 aaKnown RBP10.74□□□□□ -0.69
IFT88-203ENST00000389373 SATB1Q01826 763 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 HSP90AA2PQ14568 343 aaPredicted RBP10.74□□□□□ -0.69
IFT88-203ENST00000389373 CCDC6Q16204 474 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 DHX32Q7L7V1 743 aaKnown RBP10.74□□□□□ -0.69
IFT88-203ENST00000389373 EXOC8Q8IYI6 725 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 LNX1Q8TBB1 728 aaPredicted RBP10.74□□□□□ -0.69
IFT88-203ENST00000389373 TCP11Q8WWU5 503 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 VPS54Q9P1Q0 977 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 SPTBN2O15020 2390 aa10.74□□□□□ -0.69
IFT88-203ENST00000389373 MTCL1Q9Y4B5 1905 aaKnown RBP10.74□□□□□ -0.69
IFT88-203ENST00000389373 ACACBO00763 2458 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 CCDC196A0A1B0GTZ2 297 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 SHISA7A6NL88 538 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 EML1O00423 815 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 ASAP2O43150 1006 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 PRPF3O43395 683 aaKnown RBP10.73□□□□□ -0.69
IFT88-203ENST00000389373 DKC1O60832 514 aaKnown RBP eCLIP10.73□□□□□ -0.69
IFT88-203ENST00000389373 RHOP08100 348 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 TDGF1P13385 188 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 CEBPBP17676 345 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 HOXA9P31269 272 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 OR1D2P34982 312 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 QARSP47897 775 aaKnown RBP10.73□□□□□ -0.69
IFT88-203ENST00000389373 GRIK3Q13003 919 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 SF3A2Q15428 464 aaKnown RBP10.73□□□□□ -0.69
IFT88-203ENST00000389373 Q4G0T1 1027 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 XKR9Q5GH70 373 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 RNF20Q5VTR2 975 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 C12orf50Q8NA57 414 aaPredicted RBP10.73□□□□□ -0.69
IFT88-203ENST00000389373 CCDC148Q8NFR7 591 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 PIK3R5Q8WYR1 880 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 ELSPBP1Q96BH3 223 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 CCDC51Q96ER9 411 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 ESYT1Q9BSJ8 1104 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 TRMT61BQ9BVS5 477 aaKnown RBP10.73□□□□□ -0.69
IFT88-203ENST00000389373 DHX33Q9H6R0 707 aaKnown RBP10.73□□□□□ -0.69
IFT88-203ENST00000389373 KCNH3Q9ULD8 1083 aa10.73□□□□□ -0.69
IFT88-203ENST00000389373 DOCK6Q96HP0 2047 aa10.72□□□□□ -0.69
IFT88-203ENST00000389373 ZFHX4Q86UP3 3567 aa10.72□□□□□ -0.69
IFT88-203ENST00000389373 KIF4AO95239 1232 aa10.72□□□□□ -0.69
IFT88-203ENST00000389373 PROS1P07225 676 aa10.72□□□□□ -0.69
IFT88-203ENST00000389373 ARF4P18085 180 aaPredicted RBP10.72□□□□□ -0.69
IFT88-203ENST00000389373 GDI1P31150 447 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms