RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 C2CD6Q53TS8 623 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 LRRC55Q6ZSA7 311 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 RUSC1Q9BVN2 902 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 NDE1Q9NXR1 346 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 CFLARO15519 480 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 RFX1P22670 979 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 RPL21P46778 160 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 KCNJ2P63252 427 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 AADACL2Q6P093 401 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 HAUS6Q7Z4H7 955 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 TEKT4Q8WW24 435 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 CYP4F11Q9HBI6 524 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 SCINQ9Y6U3 715 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 ZBED4O75132 1171 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 SERPINB2P05120 415 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 HNRNPH3P31942 346 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 TPD52P55327 224 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 PSMC6P62333 389 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 MRPS35P82673 323 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 SEPT6Q14141 434 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 RCSD1Q6JBY9 416 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 RGS9BPQ6ZS82 235 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 TTLL3Q9Y4R7 772 aa13.96□□□□□ -0.17
TRAPPC9-201ENST00000389328 STK10O94804 968 aaKnown RBP13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 UBTFL6P0CB48 400 aaPredicted RBP13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 HSP90AA5PQ58FG0 334 aa13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 RHPN2Q8IUC4 686 aa13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 ATP8B4Q8TF62 1192 aa13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 DCAF4Q8WV16 495 aa13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 TNFRSF25Q93038 417 aa13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 PHTF1Q9UMS5 762 aa13.96□□□□□ -0.18
TRAPPC9-201ENST00000389328 MYO5BQ9ULV0 1848 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 DENND3A2RUS2 1198 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 BBOX1O75936 387 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 DNAJC8O75937 253 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 ENO1P06733 434 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 DRD4P21917 467 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 TMED1Q13445 227 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 DLGAP5Q15398 846 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 ATG16L1Q676U5 607 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 LVRNQ6Q4G3 990 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZFATQ9P243 1243 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 UVRAGQ9P2Y5 699 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 MARCOQ9UEW3 520 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 TACC3Q9Y6A5 838 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 DCDC2CA8MYV0 355 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 RIPK2O43353 540 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 CCDC22O60826 627 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 KRT37O76014 449 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 SERPINB4P48594 390 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 TFAMQ00059 246 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 ALCAMQ13740 583 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 GIT2Q14161 759 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 SMAD1Q15797 465 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 ERMARDQ5T6L9 678 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 MYO3BQ8WXR4 1341 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 HSPH1Q92598 858 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 SEPT10Q9P0V9 454 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 PCSK1NQ9UHG2 260 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 PSMA2P25787 234 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 CYFIP1Q7L576 1253 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZNF354CQ86Y25 554 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 TMEM237Q96Q45 408 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 BCAP29Q9UHQ4 241 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 MAGED2Q9UNF1 606 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 SMG5Q9UPR3 1016 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 SLC4A7Q9Y6M7 1214 aa13.95□□□□□ -0.18
TRAPPC9-201ENST00000389328 AGLP35573 1532 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 CREB3O43889 395 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 NFIXQ14938 502 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 HIF1AQ16665 826 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 MTERF2Q49AM1 385 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 ERICH1Q86X53 443 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 CEP120Q8N960 986 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 SLC26A7Q8TE54 656 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 HSPBP1Q9NZL4 362 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 DNM1LO00429 736 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 RALAP11233 206 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 GPSM2P81274 684 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 KLHL38Q2WGJ6 581 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 BTNL9Q6UXG8 535 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 TMEM179Q6ZVK1 233 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 ATP11CQ8NB49 1132 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 CEP70Q8NHQ1 597 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 FAF2Q96CS3 445 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 NARFQ9UHQ1 456 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 GRIN2DO15399 1336 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 FECHP22830 423 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 NPEPPSP55786 919 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 AP2B1P63010 937 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 RCN1Q15293 331 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 SLC30A10Q6XR72 485 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 MIGA2Q7L4E1 593 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms