RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 VNN1O95497 513 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 ITGBL1O95965 494 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 FTLP02792 175 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 TGFB3P10600 412 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 H2AFXP16104 143 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 ZNF211Q13398 564 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 NFIL3Q16649 462 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 FAM182AQ5T1J6 154 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 PAPD7Q5XG87 772 aaKnown RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 SLC35G2Q8TBE7 412 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 CPA5Q8WXQ8 436 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 SYN2Q92777 582 aaPredicted RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 AP1M1Q9BXS5 423 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 EDEM3Q9BZQ6 932 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 ARHGAP39Q9C0H5 1083 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 MTMR12Q9C0I1 747 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 ST6GALNAC4Q9H4F1 302 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 CDHR5Q9HBB8 845 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 ZCCHC17Q9NP64 241 aaKnown RBP10.97□□□□□ -0.65
LTN1-203ENST00000389195 AKT3Q9Y243 479 aa10.97□□□□□ -0.65
LTN1-203ENST00000389195 KCNK3O14649 394 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 ADCY3O60266 1144 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 MSCO60682 206 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 CHRNB2P17787 502 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 TFAMQ00059 246 aaKnown RBP10.96□□□□□ -0.65
LTN1-203ENST00000389195 DAAM2Q86T65 1068 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 FBXL13Q8NEE6 735 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 TRIM58Q8NG06 486 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 ATP8B4Q8TF62 1192 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 SCFD2Q8WU76 684 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 PSPC1Q8WXF1 523 aaKnown RBP10.96□□□□□ -0.65
LTN1-203ENST00000389195 MAML3Q96JK9 1138 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 MFSD14AQ96MC6 490 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 LRRC1Q9BTT6 524 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 RBM12Q9NTZ6 932 aaKnown RBP10.96□□□□□ -0.65
LTN1-203ENST00000389195 JRKLQ9Y4A0 524 aa10.96□□□□□ -0.65
LTN1-203ENST00000389195 GTPBP10A4D1E9 387 aaKnown RBP10.96□□□□□ -0.66
LTN1-203ENST00000389195 CTGFP29279 349 aa10.96□□□□□ -0.66
LTN1-203ENST00000389195 NAMPTP43490 491 aa10.96□□□□□ -0.66
LTN1-203ENST00000389195 GYS2P54840 703 aa10.96□□□□□ -0.66
LTN1-203ENST00000389195 HIC1Q14526 733 aa10.96□□□□□ -0.66
LTN1-203ENST00000389195 KIZQ2M2Z5 673 aa10.96□□□□□ -0.66
LTN1-203ENST00000389195 DMGDHQ9UI17 866 aaKnown RBP10.96□□□□□ -0.66
LTN1-203ENST00000389195 PNMA3Q9UL41 463 aa10.96□□□□□ -0.66
LTN1-203ENST00000389195 HES2Q9Y543 173 aa10.96□□□□□ -0.66
LTN1-203ENST00000389195 BUB1BO60566 1050 aaPredicted RBP10.95□□□□□ -0.66
LTN1-203ENST00000389195 HLA-DRAP01903 254 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 TUBB4AP04350 444 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 WEE2P0C1S8 567 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 MARCKSL1P49006 195 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 CAP1Q01518 475 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
LTN1-203ENST00000389195 FBXL18Q96ME1 805 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 SCLT1Q96NL6 688 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 AGPAT1Q99943 283 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 PDCL3Q9H2J4 239 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 ABCB6Q9NP58 842 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 NR2E1Q9Y466 385 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 NUB1Q9Y5A7 615 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 A0A0G2JMZ2 1700 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 A0A0B4J269 797 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 H3BRB1 525 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 PJA2O43164 708 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 EXTL3O43909 919 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 DKC1O60832 514 aaKnown RBP eCLIP10.95□□□□□ -0.66
LTN1-203ENST00000389195 TBC1D8O95759 1140 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 PRKCBP05771 671 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 H2AFZP0C0S5 128 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 CXCL8P10145 99 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 FERP16591 822 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 PIK3CAP42336 1068 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 RAP1GAPP47736 663 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 H2AFVQ71UI9 128 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 KLHL7Q8IXQ5 586 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 C16orf70Q9BSU1 422 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 KATNBL1Q9H079 304 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 NUCKS1Q9H1E3 243 aaKnown RBP10.95□□□□□ -0.66
LTN1-203ENST00000389195 TUT1Q9H6E5 874 aaKnown RBP10.95□□□□□ -0.66
LTN1-203ENST00000389195 IFT122Q9HBG6 1241 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 TMEM8AQ9HCN3 771 aa10.95□□□□□ -0.66
LTN1-203ENST00000389195 CGNQ9P2M7 1197 aaKnown RBP10.95□□□□□ -0.66
LTN1-203ENST00000389195 RANBP2P49792 3224 aaKnown RBP10.95□□□□□ -0.66
LTN1-203ENST00000389195 GPR25O00155 361 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 PHACTR2O75167 634 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 KRT19P08727 400 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 PRKCIP41743 596 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 CETN1Q12798 172 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 ALCAMQ13740 583 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 TAF1CQ15572 869 aaPredicted RBP10.94□□□□□ -0.66
LTN1-203ENST00000389195 TMEM270Q6UE05 265 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 ALS2CR12Q96Q35 445 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 TINF2Q9BSI4 451 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 SYT11Q9BT88 431 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 TSGA10Q9BZW7 698 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 MEFVO15553 781 aaPredicted RBP10.94□□□□□ -0.66
LTN1-203ENST00000389195 C4BPAP04003 597 aaKnown RBP10.94□□□□□ -0.66
LTN1-203ENST00000389195 ITGA4P13612 1032 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 CYP11B1P15538 503 aa10.94□□□□□ -0.66
LTN1-203ENST00000389195 CDH8P55286 799 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms