RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 LCA5Q86VQ0 697 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 RASSF4Q9H2L5 321 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 PVALEFA0A1B0GWK0 134 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 COPEO14579 308 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 EPHB4P54760 987 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 COPS2P61201 443 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 PRKCEQ02156 737 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 ADCY10Q96PN6 1610 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 CLNS1AP54105 237 aaKnown RBP15.75■□□□□ 0.11
LRRK1-201ENST00000388948 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 PABPC5Q96DU9 382 aaKnown RBP15.75■□□□□ 0.11
LRRK1-201ENST00000388948 ALKQ9UM73 1620 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 RAG1P15918 1043 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 TGFB2P61812 414 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 EMC2Q15006 297 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 CCNYL1Q8N7R7 359 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 GBP5Q96PP8 586 aa15.75■□□□□ 0.11
LRRK1-201ENST00000388948 PP2D1A8MPX8 630 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 KRT38O76015 456 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 DEFB128Q7Z7B8 93 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 RASSF3Q86WH2 238 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 ABI2Q9NYB9 513 aaPredicted RBP15.74■□□□□ 0.11
LRRK1-201ENST00000388948 CCDC151A5D8V7 595 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 PRCPP42785 496 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 CCT5P48643 541 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 BCAS4Q8TDM0 211 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 TTC17Q96AE7 1141 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 ZMYND12Q9H0C1 365 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 PARVAQ9NVD7 372 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 ATP9BO43861 1147 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 ITPK1Q13572 414 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 PCSK9Q8NBP7 692 aaKnown RBP15.74■□□□□ 0.11
LRRK1-201ENST00000388948 MED15Q96RN5 788 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 TIPINQ9BVW5 301 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 FTLP02792 175 aaPredicted RBP15.74■□□□□ 0.11
LRRK1-201ENST00000388948 RCAN1P53805 252 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 NLRP11P59045 1033 aaKnown RBP15.74■□□□□ 0.11
LRRK1-201ENST00000388948 TRIM28Q13263 835 aaKnown RBP15.74■□□□□ 0.11
LRRK1-201ENST00000388948 ATF7IP2Q5U623 682 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 CDKL3Q8IVW4 592 aaPredicted RBP15.74■□□□□ 0.11
LRRK1-201ENST00000388948 PCDHGB4Q9UN71 923 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 APOL1O14791 398 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 CHRNA3P32297 505 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 TRIM48Q8IWZ4 208 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 TEKT2Q9UIF3 430 aa15.74■□□□□ 0.11
LRRK1-201ENST00000388948 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 NRKQ7Z2Y5 1582 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 NMT1P30419 496 aaKnown RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 GCLCP48506 637 aaPredicted RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 C10orf120Q5SQS8 335 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 MYRIPQ8NFW9 859 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 NRBP1Q9UHY1 535 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 EEF1B2P24534 225 aaKnown RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 CDC27P30260 824 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 SLC7A5Q01650 507 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 L3MBTL1Q9Y468 752 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 TTLL13PA6NNM8 815 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 NPTXRO95502 500 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 SLC25A13Q9UJS0 675 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 KPNA7A9QM74 516 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 PODXLO00592 558 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 RFC5P40937 340 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 TMPRSS15P98073 1019 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 CUL1Q13616 776 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 SMAP1Q8IYB5 467 aaPredicted RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 MIF4GDA9UHW6 222 aaKnown RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 PALMO75781 387 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 PLA2G4FQ68DD2 849 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 COL23A1Q86Y22 540 aaPredicted RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 AGBL1Q96MI9 1066 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 DDX56Q9NY93 547 aaKnown RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 GPR182O15218 404 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 ZC3H18Q86VM9 953 aaKnown RBP15.73■□□□□ 0.11
LRRK1-201ENST00000388948 ZNF34Q8IZ26 560 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 C18orf8Q96DM3 657 aa15.73■□□□□ 0.11
LRRK1-201ENST00000388948 PNPLA7Q6ZV29 1317 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 DDX5P17844 614 aaKnown RBP15.72■□□□□ 0.11
LRRK1-201ENST00000388948 NAGPAQ9UK23 515 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 USP42Q9H9J4 1324 aaKnown RBP15.72■□□□□ 0.11
LRRK1-201ENST00000388948 E2F6O75461 281 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 DDHD2O94830 711 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 HIST1H2AGP0C0S8 130 aaPredicted RBP15.72■□□□□ 0.11
LRRK1-201ENST00000388948 MYBL1P10243 752 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 RALBP11234 206 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 HIST1H2ADP20671 130 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 TDRD10Q5VZ19 366 aaKnown RBP15.72■□□□□ 0.11
LRRK1-201ENST00000388948 CCDC197Q8NCU1 140 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 HIST1H2AHQ96KK5 128 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 HIST1H2AJQ99878 128 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 H2AFJQ9BTM1 129 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
LRRK1-201ENST00000388948 TAP1Q03518 808 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 MAP1SQ66K74 1059 aaPredicted RBP15.72■□□□□ 0.11
LRRK1-201ENST00000388948 ATPAF2Q8N5M1 289 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 NPHP3-ACAD11A0A0J9YXS1 232 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 RRM2BQ7LG56 351 aa15.72■□□□□ 0.11
LRRK1-201ENST00000388948 TDRD7Q8NHU6 1098 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms