RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CD274Q9NZQ7 290 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 IP6K2Q9UHH9 426 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 AIM2O14862 343 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 SEMA3EO15041 775 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 KCNA3P22001 575 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 CDC37Q16543 378 aaPredicted RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 DGKHQ86XP1 1220 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 P3H2Q8IVL5 708 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 CNKSR1Q969H4 720 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 CCT7Q99832 543 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 MAN1C1Q9NR34 630 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 SPATA2Q9UM82 520 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 APOL1O14791 398 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 DGKIO75912 1065 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 RHOBTB1O94844 696 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 EIF2S1P05198 315 aaKnown RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 BNIPLQ7Z465 357 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 CCDC60Q8IWA6 550 aaPredicted RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 ZNF341Q9BYN7 854 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 KANSL2Q9H9L4 492 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 KLC4Q9NSK0 619 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 FAM217BQ9NTX9 383 aaPredicted RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 GID8Q9NWU2 228 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 RHBDL2Q9NX52 303 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 SPASTQ9UBP0 616 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 MARCOQ9UEW3 520 aaPredicted RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 NCK2O43639 380 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 RALAP11233 206 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 DARSP14868 501 aaKnown RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 FGFR4P22455 802 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 SERPINB3P29508 390 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 PHKA2P46019 1235 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 ARSEP51690 589 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 VEPH1Q14D04 833 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 KIF2CQ99661 725 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 WWP1Q9H0M0 922 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 POLR3AO14802 1390 aaPredicted RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 KCNN4O15554 427 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 TRIM13O60858 407 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 MMP1P03956 469 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 GRIK1P39086 918 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 IREB2P48200 963 aaKnown RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 CDH6P55285 790 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 AKIRIN2Q53H80 203 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 PPP4R3CPQ6ZMV5 832 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 CDKL3Q8IVW4 592 aaPredicted RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 IL17RAQ96F46 866 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 ZNF496Q96IT1 587 aaPredicted RBP6.18□□□□□ -1.42
RFX3-204ENST00000382004 TRIM62Q9BVG3 475 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 GREM2Q9H772 168 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 LATS2Q9NRM7 1088 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 IMPAD1Q9NX62 359 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 ADAM21Q9UKJ8 722 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 TK2O00142 265 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 STXBP3O00186 592 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 NDUFS3O75489 264 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 C4BPBP20851 252 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 PSMC6P62333 389 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 IZUMO3Q5VZ72 239 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 ARMC6Q6NXE6 501 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 C11orf88Q6PI97 169 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 BCL2L14Q9BZR8 327 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 SERPINB13Q9UIV8 391 aa6.18□□□□□ -1.42
RFX3-204ENST00000382004 FEN1P39748 380 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 GUCA1AP43080 201 aaPredicted RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 HSPA2P54652 639 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 ACTR2P61160 394 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 THTPAQ9BU02 230 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 C10orf88Q9H8K7 445 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 ZFATQ9P243 1243 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 ESYT3A0FGR9 886 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 SRP72O76094 671 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 RPS7P62081 194 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 PCSK7Q16549 785 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 EFHBQ8N7U6 833 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 KLHL11Q9NVR0 708 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 PCDHB6Q9Y5E3 794 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 SETD1BQ9UPS6 1966 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 MIF4GDA9UHW6 222 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 SLC16A4O15374 487 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 FTLP02792 175 aaPredicted RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 HMBSP08397 361 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 HOXB7P09629 217 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 USP17L8P0C7I0 530 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CDC27P30260 824 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 EIF3EP60228 445 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 ST8SIA6P61647 398 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 NFRKBQ6P4R8 1299 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 LAYNQ6UX15 382 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 SHCBP1Q8NEM2 672 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 ASAP3Q8TDY4 903 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 EAF2Q96CJ1 260 aaPredicted RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 DYNLL2Q96FJ2 89 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CARD9Q9H257 536 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 POLD4Q9HCU8 107 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CAND2O75155 1236 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CYBBP04839 570 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 IRF1P10914 325 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 TRADDQ15628 312 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms