RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 KMT5BQ4FZB7 885 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 KANK3Q6NY19 840 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 P2RX5Q93086 422 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 PPP2R3CQ969Q6 453 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 TCHPQ9BT92 498 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 HAPLN2Q9GZV7 340 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 NSUN3Q9H649 340 aaKnown RBP17.7■□□□□ 0.42
SNRPB-201ENST00000381342 CDH23Q9H251 3354 aa17.7■□□□□ 0.42
SNRPB-201ENST00000381342 ANKRD63C9JTQ0 380 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 PRPF6O94906 941 aaKnown RBP17.69■□□□□ 0.42
SNRPB-201ENST00000381342 MLH1P40692 756 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 MATR3P43243 847 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNRPB-201ENST00000381342 AFF1P51825 1210 aaKnown RBP17.69■□□□□ 0.42
SNRPB-201ENST00000381342 ALCAMQ13740 583 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 GLB1LQ6UWU2 654 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 EPM2AIP1Q7L775 607 aaPredicted RBP17.69■□□□□ 0.42
SNRPB-201ENST00000381342 APBB1IPQ7Z5R6 666 aaPredicted RBP17.69■□□□□ 0.42
SNRPB-201ENST00000381342 HACE1Q8IYU2 909 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 ERCC4Q92889 916 aaPredicted RBP17.69■□□□□ 0.42
SNRPB-201ENST00000381342 CCDC34Q96HJ3 373 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 ACCSQ96QU6 501 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 SLC39A2Q9NP94 309 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 SNTG2Q9NY99 539 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 GDAQ9Y2T3 454 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 ANK1P16157 1881 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 PLXNA4Q9HCM2 1894 aa17.69■□□□□ 0.42
SNRPB-201ENST00000381342 ATG2AQ2TAZ0 1938 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 NCK2O43639 380 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 OFD1O75665 1012 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 RECQL4O94761 1208 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 LINC00271P0C7V0 271 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 MCF2P10911 925 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 OSTNP61366 133 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 MCL1Q07820 350 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 SEZ6Q53EL9 994 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 EP400NLQ6ZTU2 488 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 STXBP4Q6ZWJ1 553 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 LRRC43Q8N309 656 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 ZFP42Q96MM3 310 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 LMBRD1Q9NUN5 540 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 KLK14Q9P0G3 267 aa17.68■□□□□ 0.42
SNRPB-201ENST00000381342 TRANK1O15050 2925 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 ARL5CA6NH57 179 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 EIF3DO15371 548 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNRPB-201ENST00000381342 CLDN3O15551 220 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 GRM5P41594 1212 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 TFF2Q03403 129 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 NOMO2Q5JPE7 1267 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 LRRC55Q6ZSA7 311 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 NELFCDQ8IXH7 590 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 THNSL1Q8IYQ7 743 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 SYCP3Q8IZU3 236 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 KIAA0895Q8NCT3 520 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 URGCPQ8TCY9 931 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 GAD1Q99259 594 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 MRPL9Q9BYD2 267 aaKnown RBP17.67■□□□□ 0.42
SNRPB-201ENST00000381342 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
SNRPB-201ENST00000381342 PLAGL2Q9UPG8 496 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 EXOC7Q9UPT5 735 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 GIT1Q9Y2X7 761 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 UBE4BO95155 1302 aa17.67■□□□□ 0.42
SNRPB-201ENST00000381342 GRM6O15303 877 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 RHOBTB3O94955 611 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 LAG3P18627 525 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 HOXD13P35453 343 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 SCNN1GP51170 649 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 STK4Q13043 487 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 TCEAL5Q5H9L2 206 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 ZBTB41Q5SVQ8 909 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 KLHL23Q8NBE8 558 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 MICAL1Q8TDZ2 1067 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 SCFD1Q8WVM8 642 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 CCDC47Q96A33 483 aaKnown RBP17.66■□□□□ 0.42
SNRPB-201ENST00000381342 UHRF1Q96T88 793 aaPredicted RBP17.66■□□□□ 0.42
SNRPB-201ENST00000381342 MSTO1Q9BUK6 570 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 CCDC94Q9BW85 323 aaPredicted RBP17.66■□□□□ 0.42
SNRPB-201ENST00000381342 GBP3Q9H0R5 595 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 CXCL16Q9H2A7 254 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 CWH43Q9H720 699 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 UBE2ZQ9H832 354 aaPredicted RBP17.66■□□□□ 0.42
SNRPB-201ENST00000381342 ALG13Q9NP73 1137 aaKnown RBP17.66■□□□□ 0.42
SNRPB-201ENST00000381342 UBN1Q9NPG3 1134 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 TBC1D13Q9NVG8 400 aa17.66■□□□□ 0.42
SNRPB-201ENST00000381342 HOOK1Q9UJC3 728 aaKnown RBP17.66■□□□□ 0.42
SNRPB-201ENST00000381342 A0A0B4J269 797 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 GOLGA6L22H0YM25 854 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 FAM189A1O60320 539 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 B4GALT3O60512 393 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 CSPG5O95196 566 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 POMCP01189 267 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 PBX3P40426 434 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 RNASELQ05823 741 aaKnown RBP17.65■□□□□ 0.42
SNRPB-201ENST00000381342 KCNB1Q14721 858 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 ZNF507Q8TCN5 953 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 ADAMTS19Q8TE59 1207 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 RSPH1Q8WYR4 309 aa17.65■□□□□ 0.42
SNRPB-201ENST00000381342 RPS6KC1Q96S38 1066 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms