RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 GABBR1Q9UBS5 961 aa13.6□□□□□ -0.23
PUDP-201ENST00000381077 SLC9A2Q9UBY0 812 aa13.6□□□□□ -0.23
PUDP-201ENST00000381077 RSPH14Q9UHP6 348 aa13.6□□□□□ -0.23
PUDP-201ENST00000381077 CNOT7Q9UIV1 285 aaKnown RBP13.6□□□□□ -0.23
PUDP-201ENST00000381077 ZNF214Q9UL59 606 aaPredicted RBP13.6□□□□□ -0.23
PUDP-201ENST00000381077 TRPC6Q9Y210 931 aa13.6□□□□□ -0.23
PUDP-201ENST00000381077 SPATA31C2B4DYI2 1134 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 ANKRD63C9JTQ0 380 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 EXTL3O43909 919 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 LDHAP00338 332 aaKnown RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 PTPRAP18433 802 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 COMTP21964 271 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 MDH1P40925 334 aaKnown RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 MAGEA9P43362 315 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 MAP2K1Q02750 393 aaPredicted RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 ZNF844Q08AG5 666 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 PSMD6Q15008 389 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 TRADDQ15628 312 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 PLA2G4FQ68DD2 849 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 TRIM72Q6ZMU5 477 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 MICALCLQ6ZW33 695 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 JAMLQ86YT9 394 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 DDX1Q92499 740 aaKnown RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 PCDHB18PQ96TA0 734 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 RASSF4Q9H2L5 321 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 CNOT10Q9H9A5 744 aaKnown RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 CYP26B1Q9NR63 512 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 ZDHHC18Q9NUE0 388 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 MTRF1LQ9UGC7 380 aaKnown RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 KIAA1217Q5T5P2 1943 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 COL11A1P12107 1806 aaPredicted RBP13.59□□□□□ -0.23
PUDP-201ENST00000381077 SIP14410 1827 aa13.59□□□□□ -0.23
PUDP-201ENST00000381077 CYP26A1O43174 497 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 ZNF862O60290 1169 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 ATG7O95352 703 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 PAEPP09466 180 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 LSP1P33241 339 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 RWDD2BP57060 319 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.23
PUDP-201ENST00000381077 SLC39A4Q6P5W5 647 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 SYDE1Q6ZW31 735 aaPredicted RBP13.58□□□□□ -0.23
PUDP-201ENST00000381077 SV2AQ7L0J3 742 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 SEMA4DQ92854 862 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 NEUROG2Q9H2A3 272 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 C1orf112Q9NSG2 853 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 HOXC10Q9NYD6 342 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 LCMT1Q9UIC8 334 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 HACL1Q9UJ83 578 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 PCDHB2Q9Y5E7 798 aa13.58□□□□□ -0.23
PUDP-201ENST00000381077 HNRNPDLO14979 420 aaKnown RBP13.58□□□□□ -0.24
PUDP-201ENST00000381077 DHX9Q08211 1270 aaKnown RBP13.58□□□□□ -0.24
PUDP-201ENST00000381077 PTP4A2Q12974 167 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 SLMAPQ14BN4 828 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 CLEC16AQ2KHT3 1053 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.24
PUDP-201ENST00000381077 SLC47A2Q86VL8 602 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 CHST13Q8NET6 341 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 UBLCP1Q8WVY7 318 aaPredicted RBP13.58□□□□□ -0.24
PUDP-201ENST00000381077 VCPIP1Q96JH7 1222 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 TMEM109Q9BVC6 243 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 NUP85Q9BW27 656 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.24
PUDP-201ENST00000381077 LRRC19Q9H756 370 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 CYP39A1Q9NYL5 469 aa13.58□□□□□ -0.24
PUDP-201ENST00000381077 FZD9O00144 591 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 SUPT20HL2P0C7V6 817 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 USP8P40818 1118 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 PTGIRP43119 386 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 CATSPERGQ6ZRH7 1159 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 DDX42Q86XP3 938 aaKnown RBP eCLIP13.57□□□□□ -0.24
PUDP-201ENST00000381077 SLC13A5Q86YT5 568 aaPredicted RBP13.57□□□□□ -0.24
PUDP-201ENST00000381077 MICALL2Q8IY33 904 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 PRELID2Q8N945 189 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 TAS1R2Q8TE23 839 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 ZNF653Q96CK0 615 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 XPNPEP1Q9NQW7 623 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 FEZ2Q9UHY8 353 aaPredicted RBP13.57□□□□□ -0.24
PUDP-201ENST00000381077 GOLGA8IPA6NC78 632 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 GOLGA8JA6NMD2 632 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 NDUFAB1O14561 156 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 SPOPO43791 374 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 GRIN3BO60391 1043 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 MMEP08473 750 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 UNGP13051 313 aaPredicted RBP13.57□□□□□ -0.24
PUDP-201ENST00000381077 KCNA4P22459 653 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 NAMPTP43490 491 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 AP3M2P53677 418 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 ACTR2P61160 394 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 PRKCEQ02156 737 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 MESDQ14696 234 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 PTGISQ16647 500 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 ZACNQ401N2 412 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 SH3D19Q5HYK7 790 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 KCTD16Q68DU8 428 aa13.57□□□□□ -0.24
PUDP-201ENST00000381077 FOXR1Q6PIV2 292 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms