RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 STAG3L1P0CL83 205 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 NR2F2P24468 414 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 AKAP5P24588 427 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 ERCC5P28715 1186 aaPredicted RBP20.49■□□□□ 0.87
SMN2-202ENST00000380742 KCNJ6P48051 423 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 CT47A1Q5JQC4 288 aaPredicted RBP20.49■□□□□ 0.87
SMN2-202ENST00000380742 FOXR2Q6PJQ5 311 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 AGMOQ6ZNB7 445 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 TMCO2Q7Z6W1 182 aaPredicted RBP20.49■□□□□ 0.87
SMN2-202ENST00000380742 GPD1LQ8N335 351 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 TOP1MTQ969P6 601 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 FBXL18Q96ME1 805 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 FAM213AQ9BRX8 229 aa20.49■□□□□ 0.87
SMN2-202ENST00000380742 CPSF3Q9UKF6 684 aaKnown RBP20.49■□□□□ 0.87
SMN2-202ENST00000380742 KIAA0391O15091 583 aaKnown RBP20.48■□□□□ 0.87
SMN2-202ENST00000380742 MEFVO15553 781 aaPredicted RBP20.48■□□□□ 0.87
SMN2-202ENST00000380742 EXTL3O43909 919 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 ITGA4P13612 1032 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 ADAM9Q13443 819 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 MYBPC2Q14324 1141 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 ZC3H3Q8IXZ2 948 aaKnown RBP20.48■□□□□ 0.87
SMN2-202ENST00000380742 XXYLT1Q8NBI6 393 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 NOC3LQ8WTT2 800 aaKnown RBP20.48■□□□□ 0.87
SMN2-202ENST00000380742 PGBD4Q96DM1 585 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 EEF2KMTQ96G04 330 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 RNF19AQ9NV58 838 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 PCDHB7Q9Y5E2 793 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 COL4A6Q14031 1691 aa20.48■□□□□ 0.87
SMN2-202ENST00000380742 LAMA2P24043 3122 aaKnown RBP20.48■□□□□ 0.87
SMN2-202ENST00000380742 RECQL4O94761 1208 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 UPP2O95045 317 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 LDHAP00338 332 aaKnown RBP20.47■□□□□ 0.87
SMN2-202ENST00000380742 RPL13P26373 211 aaKnown RBP20.47■□□□□ 0.87
SMN2-202ENST00000380742 CASP4P49662 377 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 LRRC55Q6ZSA7 311 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 CBWD2Q8IUF1 395 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 NPAS4Q8IUM7 802 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 RDH13Q8NBN7 331 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 ACAP3Q96P50 834 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 CCDC94Q9BW85 323 aaPredicted RBP20.47■□□□□ 0.87
SMN2-202ENST00000380742 CXCL16Q9H2A7 254 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 PARP2Q9UGN5 583 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 LRFN2Q9ULH4 789 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 SLC4A7Q9Y6M7 1214 aa20.47■□□□□ 0.87
SMN2-202ENST00000380742 EXOC3O60645 756 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 CLTAP09496 248 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 FGFR1P11362 822 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 BMP8BP34820 402 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
SMN2-202ENST00000380742 ENOX2Q16206 610 aaKnown RBP20.46■□□□□ 0.87
SMN2-202ENST00000380742 KYAT1Q16773 422 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 SLC10A6Q3KNW5 377 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 CLLU1OSQ5K130 101 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 LRSAM1Q6UWE0 723 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 HACE1Q8IYU2 909 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 MTIF3Q9H2K0 278 aaKnown RBP20.46■□□□□ 0.87
SMN2-202ENST00000380742 KLK14Q9P0G3 267 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 CETN3O15182 167 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 ADRB2P07550 413 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 CXCL8P10145 99 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 GATMP50440 423 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 AFF1P51825 1210 aaKnown RBP20.46■□□□□ 0.87
SMN2-202ENST00000380742 ZNF445P59923 1031 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 SNRNP35Q16560 246 aaKnown RBP20.46■□□□□ 0.87
SMN2-202ENST00000380742 CEP135Q66GS9 1140 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 FAM117BQ6P1L5 589 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 CSGALNACT2Q8N6G5 542 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 RNPC3Q96LT9 517 aaKnown RBP20.46■□□□□ 0.87
SMN2-202ENST00000380742 RSAD1Q9HA92 442 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 KIAA1586Q9HCI6 787 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 RNF216Q9NWF9 866 aaPredicted RBP20.46■□□□□ 0.87
SMN2-202ENST00000380742 GIT1Q9Y2X7 761 aa20.46■□□□□ 0.87
SMN2-202ENST00000380742 OFD1O75665 1012 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 AKAP3O75969 853 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 WNT7BP56706 349 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 ALKAL1Q6UXT8 129 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 ENOX1Q8TC92 643 aaKnown RBP20.45■□□□□ 0.86
SMN2-202ENST00000380742 HELQQ8TDG4 1101 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 ZFP42Q96MM3 310 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 SLC9A7Q96T83 725 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 GAD1Q99259 594 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 SRRTQ9BXP5 876 aaKnown RBP20.45■□□□□ 0.86
SMN2-202ENST00000380742 PRO3102Q9H379 93 aa20.45■□□□□ 0.86
SMN2-202ENST00000380742 RPF1Q9H9Y2 349 aaKnown RBP20.45■□□□□ 0.86
SMN2-202ENST00000380742 KIAA1671Q9BY89 1806 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 TTC26A0AVF1 554 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 ARL5CA6NH57 179 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 ZNF233A6NK53 670 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 DGKIO75912 1065 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 MLH1P40692 756 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 YARSP54577 528 aaKnown RBP20.44■□□□□ 0.86
SMN2-202ENST00000380742 POU5F1Q01860 360 aaKnown RBP20.44■□□□□ 0.86
SMN2-202ENST00000380742 BRSK2Q8IWQ3 736 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 GSTCDQ8NEC7 633 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 PHOSPHO2Q8TCD6 241 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 SNX27Q96L92 541 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 MFSD14AQ96MC6 490 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 CEP63Q96MT8 703 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 BPIFA3Q9BQP9 254 aa20.44■□□□□ 0.86
SMN2-202ENST00000380742 NAT10Q9H0A0 1025 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms