RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 MMP13P45452 471 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 GPC3P51654 580 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 MNAT1P51948 309 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 MCCD1P59942 119 aaPredicted RBP17.51■□□□□ 0.39
VPS16-203ENST00000380469 USP37Q86T82 979 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 CPXCR1Q8N123 301 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 ART4Q93070 314 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 TMEM109Q9BVC6 243 aa17.51■□□□□ 0.39
VPS16-203ENST00000380469 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
VPS16-203ENST00000380469 TCRBV7S2A1N4TA0A589 114 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 TMEM150BA6NC51 233 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 ANKRD63C9JTQ0 380 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 JAK3P52333 1124 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 CALCOCO2Q13137 446 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 PPP1R7Q15435 360 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 TBC1D10BQ4KMP7 808 aaPredicted RBP17.5■□□□□ 0.39
VPS16-203ENST00000380469 FKBP1CQ5VVH2 108 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 RNF207Q6ZRF8 634 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 PARD3BQ8TEW8 1205 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 P3H4Q92791 437 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 SAAL1Q96ER3 474 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 ZNF341Q9BYN7 854 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 ANKEF1Q9NU02 776 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 COQ4Q9Y3A0 265 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 RIPK2O43353 540 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 C21orf2O43822 256 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 ECEL1O95672 775 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 CNGA1P29973 690 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 ADSSP30520 456 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 SPP2Q13103 211 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 DMP1Q13316 513 aaPredicted RBP17.5■□□□□ 0.39
VPS16-203ENST00000380469 UGCGQ16739 394 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 ACAD10Q6JQN1 1059 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 CDAN1Q8IWY9 1227 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 C12orf50Q8NA57 414 aaPredicted RBP17.5■□□□□ 0.39
VPS16-203ENST00000380469 FBXL13Q8NEE6 735 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 HELQQ8TDG4 1101 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 SYTL5Q8TDW5 730 aaPredicted RBP17.5■□□□□ 0.39
VPS16-203ENST00000380469 HVCN1Q96D96 273 aa17.5■□□□□ 0.39
VPS16-203ENST00000380469 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
VPS16-203ENST00000380469 WDR64B1ANS9 1081 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 MYCLP12524 364 aaPredicted RBP17.49■□□□□ 0.39
VPS16-203ENST00000380469 EIF2AK2P19525 551 aaKnown RBP17.49■□□□□ 0.39
VPS16-203ENST00000380469 FGFR4P22455 802 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 TMC2Q8TDI7 906 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 POP1Q99575 1024 aaKnown RBP17.49■□□□□ 0.39
VPS16-203ENST00000380469 OSBPL7Q9BZF2 842 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 LRRC19Q9H756 370 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 HOMER2Q9NSB8 354 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 RAB20Q9NX57 234 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 RASGRF2O14827 1237 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 SFNP31947 248 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 GTF2H1P32780 548 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 KCNJ1P48048 391 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 IFI35P80217 286 aaPredicted RBP17.49■□□□□ 0.39
VPS16-203ENST00000380469 GHRHRQ02643 423 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 SIX1Q15475 284 aaPredicted RBP17.49■□□□□ 0.39
VPS16-203ENST00000380469 ANKRD20A8PQ5CZ79 823 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 NSMFQ6X4W1 530 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 FAM83AQ86UY5 434 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 MAP4K3Q8IVH8 894 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 TMEM161BQ8NDZ6 487 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 UHMK1Q8TAS1 419 aaKnown RBP17.49■□□□□ 0.39
VPS16-203ENST00000380469 TAAR1Q96RJ0 339 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 GMLQ99445 158 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 KMT5AQ9NQR1 393 aa17.49■□□□□ 0.39
VPS16-203ENST00000380469 INTS9Q9NV88 658 aaKnown RBP17.49■□□□□ 0.39
VPS16-203ENST00000380469 DENND3A2RUS2 1198 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 WDR46O15213 610 aaKnown RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 NPTX2P47972 431 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 PLA2G4FQ68DD2 849 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 TAOK1Q7L7X3 1001 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 CCDC25Q86WR0 208 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 CPNE8Q86YQ8 564 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 ANKS4BQ8N8V4 417 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 CCDC197Q8NCU1 140 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 RAVER2Q9HCJ3 691 aaKnown RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 KRT5P13647 590 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 HSPA1LP34931 641 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 KRT76Q01546 638 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 PGM5Q15124 567 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 LACTB2Q53H82 288 aaPredicted RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 SGO2Q562F6 1265 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 SWT1Q5T5J6 900 aaKnown RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 TRMT10CQ7L0Y3 403 aaKnown RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 SAMD3Q8N6K7 520 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 TAS1R2Q8TE23 839 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 EPS8L3Q8TE67 593 aaKnown RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 MFSD14AQ96MC6 490 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 ROPN1BQ9BZX4 212 aaPredicted RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 KDM4CQ9H3R0 1056 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 ROPN1Q9HAT0 212 aaPredicted RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 KLC4Q9NSK0 619 aa17.48■□□□□ 0.39
VPS16-203ENST00000380469 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 CTDP1Q9Y5B0 961 aaPredicted RBP17.48■□□□□ 0.39
VPS16-203ENST00000380469 CLDN3O15551 220 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 MAPK4P31152 587 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 SLCO1A2P46721 670 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 CLEC16AQ2KHT3 1053 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 MAIP1Q8WWC4 291 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms