RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PGRMC1O00264 195 aaKnown RBP24.9■■□□□ 1.58
VPS16-201ENST00000380443 SORBS3O60504 671 aa24.9■■□□□ 1.58
VPS16-201ENST00000380443 MTA2O94776 668 aa24.9■■□□□ 1.58
VPS16-201ENST00000380443 ZBTB48P10074 688 aaPredicted RBP24.9■■□□□ 1.58
VPS16-201ENST00000380443 TCF7P36402 384 aaPredicted RBP24.9■■□□□ 1.58
VPS16-201ENST00000380443 SLC26A2P50443 739 aa24.9■■□□□ 1.58
VPS16-201ENST00000380443 MOGSQ13724 837 aa24.9■■□□□ 1.58
VPS16-201ENST00000380443 EIF1ADQ8N9N8 165 aaKnown RBP24.9■■□□□ 1.58
VPS16-201ENST00000380443 TAS1R2Q8TE23 839 aa24.9■■□□□ 1.58
VPS16-201ENST00000380443 SCFD2Q8WU76 684 aa24.9■■□□□ 1.58
VPS16-201ENST00000380443 MMP19Q99542 508 aa24.9■■□□□ 1.58
VPS16-201ENST00000380443 PACSIN2Q9UNF0 486 aaPredicted RBP24.9■■□□□ 1.58
VPS16-201ENST00000380443 LRRIQ4A6NIV6 560 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 TMCO5BA8MYB1 307 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 AARSP49588 968 aaKnown RBP eCLIP24.89■■□□□ 1.58
VPS16-201ENST00000380443 EPHB4P54760 987 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 NNTQ13423 1086 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 HSP90B2PQ58FF3 399 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 C11orf63Q6NUN7 778 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 ZPBP2Q6X784 338 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 OPTNQ96CV9 577 aa24.89■■□□□ 1.58
VPS16-201ENST00000380443 GBA2Q9HCG7 927 aaPredicted RBP24.89■■□□□ 1.58
VPS16-201ENST00000380443 DMGDHQ9UI17 866 aaKnown RBP24.89■■□□□ 1.58
VPS16-201ENST00000380443 ABT1Q9ULW3 272 aaKnown RBP24.89■■□□□ 1.58
VPS16-201ENST00000380443 ADCY3O60266 1144 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 BUB1BO60566 1050 aaPredicted RBP24.89■■□□□ 1.57
VPS16-201ENST00000380443 FTLP02792 175 aaPredicted RBP24.89■■□□□ 1.57
VPS16-201ENST00000380443 USP8P40818 1118 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 PDE6CP51160 858 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 FKBP1BP68106 108 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 WDR44Q5JSH3 913 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 CELF3Q5SZQ8 465 aaKnown RBP24.89■■□□□ 1.57
VPS16-201ENST00000380443 METTL13Q8N6R0 699 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 SLC20A1Q8WUM9 679 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 GDF3Q9NR23 364 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 EHD2Q9NZN4 543 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 PNMA3Q9UL41 463 aa24.89■■□□□ 1.57
VPS16-201ENST00000380443 CEP104O60308 925 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 SGPL1O95470 568 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 DLATP10515 647 aaKnown RBP24.88■■□□□ 1.57
VPS16-201ENST00000380443 ABCB4P21439 1286 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 AP3M2P53677 418 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 BPIFB4P59827 614 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 CDR2Q01850 454 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 DMTNQ08495 405 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 SNAPC2Q13487 334 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 PPP2R5EQ16537 467 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 ZACNQ401N2 412 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 ZNF677Q86XU0 584 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 NAP1L3Q99457 506 aaPredicted RBP24.88■■□□□ 1.57
VPS16-201ENST00000380443 POP1Q99575 1024 aaKnown RBP24.88■■□□□ 1.57
VPS16-201ENST00000380443 THAP2Q9H0W7 228 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 PDE11AQ9HCR9 933 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 C1orf112Q9NSG2 853 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 SMARCAL1Q9NZC9 954 aa24.88■■□□□ 1.57
VPS16-201ENST00000380443 MIF4GDA9UHW6 222 aaKnown RBP24.87■■□□□ 1.57
VPS16-201ENST00000380443 CHRNB2P17787 502 aa24.87■■□□□ 1.57
VPS16-201ENST00000380443 TNNT3P45378 269 aaPredicted RBP24.87■■□□□ 1.57
VPS16-201ENST00000380443 MXD4Q14582 209 aaPredicted RBP24.87■■□□□ 1.57
VPS16-201ENST00000380443 LDLRAD1Q5T700 205 aa24.87■■□□□ 1.57
VPS16-201ENST00000380443 GPAT2Q6NUI2 795 aa24.87■■□□□ 1.57
VPS16-201ENST00000380443 NOP9Q86U38 636 aaKnown RBP24.87■■□□□ 1.57
VPS16-201ENST00000380443 FAM71BQ8TC56 605 aa24.87■■□□□ 1.57
VPS16-201ENST00000380443 CARD9Q9H257 536 aa24.87■■□□□ 1.57
VPS16-201ENST00000380443 SUGCTQ9HAC7 445 aa24.87■■□□□ 1.57
VPS16-201ENST00000380443 A0A0B4J269 797 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 ASB14A6NK59 587 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 CYP26A1O43174 497 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 PEX10O60683 326 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 CYP11B1P15538 503 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 ATP8B4Q8TF62 1192 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 KAT5Q92993 513 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 CAVIN3Q969G5 261 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 RPS6KC1Q96S38 1066 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 GPR20Q99678 358 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 OSGEPQ9NPF4 335 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 TAS2R14Q9NYV8 317 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 TLL2Q9Y6L7 1015 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 C4BPAP04003 597 aaKnown RBP24.86■■□□□ 1.57
VPS16-201ENST00000380443 DNA2P51530 1060 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 GRM1Q13255 1194 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 DNAAF5Q86Y56 855 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 HDAC7Q8WUI4 952 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 ARHGEF26Q96DR7 871 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 FGD4Q96M96 766 aa24.86■■□□□ 1.57
VPS16-201ENST00000380443 TOPORSQ9NS56 1045 aaPredicted RBP24.86■■□□□ 1.57
VPS16-201ENST00000380443 NOP56O00567 594 aaKnown RBP24.85■■□□□ 1.57
VPS16-201ENST00000380443 ZMYND10O75800 440 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 LY6KQ17RY6 165 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 PALB2Q86YC2 1186 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 MSTO1Q9BUK6 570 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 C2orf40Q9H1Z8 148 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 TXNRD2Q9NNW7 524 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 CTTNBP2NLQ9P2B4 639 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 HPCAL4Q9UM19 191 aa24.85■■□□□ 1.57
VPS16-201ENST00000380443 IGKV6-21A0A0C4DH24 114 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 TNNI1P19237 187 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 HTRA3P83110 453 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 FMO1Q01740 532 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 PAK2Q13177 524 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms