RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 IFI35P80217 286 aaPredicted RBP9.96□□□□□ -0.82
PTPRA-204ENST00000380393 EXOSC10Q01780 885 aaKnown RBP9.96□□□□□ -0.82
PTPRA-204ENST00000380393 GRIN1Q05586 938 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 BOLA3Q53S33 107 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 ACSBG2Q5FVE4 666 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 RNF43Q68DV7 783 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 KRT40Q6A162 431 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 ZBTB3Q9H5J0 574 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 SH2D4AQ9H788 454 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
PTPRA-204ENST00000380393 RNF14Q9UBS8 474 aa9.96□□□□□ -0.82
PTPRA-204ENST00000380393 SCN11AQ9UI33 1791 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PKD1L3Q7Z443 1732 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 TRMUO75648 421 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 CHEK2O96017 543 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 CDH3P22223 829 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 HMOX2P30519 316 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 C15orf59Q2T9L4 293 aaPredicted RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PCNX4Q63HM2 1172 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 BARGINQ6ZT62 677 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PASD1Q8IV76 773 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 ECSITQ9BQ95 431 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 GPATCH1Q9BRR8 931 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 TLR10Q9BXR5 811 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 IFIH1Q9BYX4 1025 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 STX18Q9P2W9 335 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 EXOC7Q9UPT5 735 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 NRAPQ86VF7 1730 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 SALL1Q9NSC2 1324 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 KMOO15229 486 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PPP6R2O75170 966 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 KRT4P19013 534 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 TMTC3Q6ZXV5 915 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 TMC3Q7Z5M5 1100 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 SFR1Q86XK3 245 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PYROXD1Q8WU10 500 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 TCF12Q99081 682 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 B3GNT4Q9C0J1 378 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 METTL14Q9HCE5 456 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PIH1D3Q9NQM4 214 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 ANGEL1Q9UNK9 670 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 CLEC11AQ9Y240 323 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 TELO2Q9Y4R8 837 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 WASF2Q9Y6W5 498 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 HEG1Q9ULI3 1381 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 CDK2AP1O14519 115 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 NDC80O14777 642 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 ZBED4O75132 1171 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PARNO95453 639 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 CD44P16070 742 aaKnown RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 CES1P23141 567 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 CNGA2Q16280 664 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 ACAD11Q709F0 780 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 UNC13DQ70J99 1090 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 KBTBD3Q8NAB2 608 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 SLC7A6OSQ96CW6 309 aaPredicted RBP9.95□□□□□ -0.82
PTPRA-204ENST00000380393 BABAM1Q9NWV8 329 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 DSEQ9UL01 958 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PCDHGA3Q9Y5H0 932 aa9.95□□□□□ -0.82
PTPRA-204ENST00000380393 PARP4Q9UKK3 1724 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TOGARAM1Q9Y4F4 1720 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 FAM237AA0A1B0GTK4 181 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 FAM196BA6NMK8 535 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 CBX6O95503 412 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 POLGP54098 1239 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 MED21Q13503 144 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 NT5DC1Q5TFE4 455 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 SPOPLQ6IQ16 392 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 NELFCDQ8IXH7 590 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 SLC38A6Q8IZM9 456 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 ANKRD13CQ8N6S4 541 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 EIF1ADQ8N9N8 165 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 PDZD8Q8NEN9 1154 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 IFT122Q9HBG6 1241 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 MLXIPLQ9NP71 852 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 CCDC177Q9NQR7 707 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TYW1Q9NV66 732 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TRPC5Q9UL62 973 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 CTNND2Q9UQB3 1225 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 ARHGAP10A1A4S6 786 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 GOLGA8IPA6NC78 632 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 CCDC169A6NNP5 214 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TSPAN1O60635 241 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TSPAN9O75954 239 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 TGFB3P10600 412 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 ESRRAP11474 423 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 ETFBP38117 255 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 SPAG1Q07617 926 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 KCTD19Q17RG1 926 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 FYB2Q5VWT5 728 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 MIER3Q7Z3K6 550 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 U2AF1L4Q8WU68 220 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 LRRC37BQ96QE4 947 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 UBAC1Q9BSL1 405 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 GIN1Q9NXP7 522 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 LIMA1Q9UHB6 759 aaKnown RBP9.94□□□□□ -0.82
PTPRA-204ENST00000380393 VPS51Q9UID3 782 aa9.94□□□□□ -0.82
PTPRA-204ENST00000380393 ANGPTL2Q9UKU9 493 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms