RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 PRRG3Q9BZD7 231 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 LATS2Q9NRM7 1088 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 PSMD14O00487 310 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 FBLN1P23142 703 aa11.84□□□□□ -0.51
PTCHD1-201ENST00000379361 SPTBN2O15020 2390 aa11.83□□□□□ -0.51
PTCHD1-201ENST00000379361 PDIA3P30101 505 aaKnown RBP11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 RMDN3Q96TC7 470 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 CYTH1Q15438 398 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 C6orf10Q5SRN2 563 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 PKP3Q9Y446 797 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 TRIP13Q15645 432 aaPredicted RBP11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 TMEM179Q6ZVK1 233 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 OSBPL6Q9BZF3 934 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 ARMC7Q9H6L4 198 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 BFARQ9NZS9 450 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 KIF20BQ96Q89 1820 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 PREPLQ4J6C6 727 aaPredicted RBP11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 UCMAQ8WVF2 138 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 MUC3BQ9H195 1237 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 VPS11Q9H270 941 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 FAM135BQ49AJ0 1406 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 CCDC130P13994 396 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 CDC25BP30305 580 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 CENPTQ96BT3 561 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 SLAIN2Q9P270 581 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 PSMD3O43242 534 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 PPP6R2O75170 966 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 CIAO1O76071 339 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 P3H1Q32P28 736 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 GID8Q9NWU2 228 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 PI4KAP42356 2102 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 NR1D1P20393 614 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 TMEM132BQ14DG7 1078 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 PRUNE1Q86TP1 453 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 KIAA2013Q8IYS2 634 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 ENGASEQ8NFI3 743 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 ZNF302Q9NR11 478 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 ADAM22Q9P0K1 906 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 AMPD2Q01433 879 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 MED15Q96RN5 788 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 H2AFYO75367 372 aaKnown RBP11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 FGGP02679 453 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 YWHAQP27348 245 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 TCEAL5Q5H9L2 206 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 NLNQ9BYT8 704 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 CAMKK2Q96RR4 588 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 SOX13Q9UN79 622 aa11.83□□□□□ -0.52
PTCHD1-201ENST00000379361 CHGBP05060 677 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 VSNL1P62760 191 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 PDAP1Q13442 181 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SENP2Q9HC62 589 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 BSDC1Q9NW68 430 aaPredicted RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 C3orf70A6NLC5 250 aaPredicted RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SLC16A2P36021 539 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 UBXN2AP68543 259 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 C11orf88Q6PI97 169 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 QTRT2Q9H974 415 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 TRIM13O60858 407 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 RNASEH1O60930 286 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 DEFA1P59665 94 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 DEFA3P59666 94 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 GUCY1A3Q02108 690 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 PCYOX1LQ8NBM8 494 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SH3GL2Q99962 352 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SYBUQ9NX95 663 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 CDC23Q9UJX2 597 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 LOC102724428A0A0B4J2F2 783 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SIK1P57059 783 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 RAB14P61106 215 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 MTFR1Q15390 333 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 KDM5CP41229 1560 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SNRNP48Q6IEG0 339 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SFNP31947 248 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 RGS2P41220 211 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 BTNL9Q6UXG8 535 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 RNASE11Q8TAA1 199 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 USP13Q92995 863 aaPredicted RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 KIF12Q96FN5 646 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 CATSPERBQ9H7T0 1116 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SH3GLB2Q9NR46 395 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 EZH2Q15910 746 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 ZMYND8Q9ULU4 1186 aaPredicted RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 MDC1Q14676 2089 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 RRM2P31350 389 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 NPEPPSP55786 919 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 BFSP2Q13515 415 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 ZNF512Q96ME7 567 aaPredicted RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 SLC9A2Q9UBY0 812 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 FKBP9O95302 570 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 HNMTP50135 292 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 HDLBPQ00341 1268 aaKnown RBP11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 FKBP9P1Q75LS8 142 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 ADCY3O60266 1144 aa11.82□□□□□ -0.52
PTCHD1-201ENST00000379361 ZMYND10O75800 440 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms