RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 FGF14Q92915 247 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 PAAF1Q9BRP4 392 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 PHF20Q9BVI0 1012 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 FNIP2Q9P278 1114 aa19.75■□□□□ 0.75
PDLIM4-202ENST00000379018 CACNA1AO00555 2505 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 A0A087WWV3 80 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 FAM205CA6NFA0 338 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 ANHXE9PGG2 379 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 BAG4O95429 457 aaKnown RBP19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 HSP90AA2PQ14568 343 aaPredicted RBP19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 UBXN2BQ14CS0 331 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 AMHR2Q16671 573 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 TMEM132AQ24JP5 1023 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 PPM1LQ5SGD2 360 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 MAEAQ7L5Y9 396 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 GSTCDQ8NEC7 633 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 ZNF274Q96GC6 653 aaPredicted RBP19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 POLR3FQ9H1D9 316 aaPredicted RBP19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 SLC2A4RGQ9NR83 387 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 DLGAP2Q9P1A6 1054 aa19.74■□□□□ 0.75
PDLIM4-202ENST00000379018 SF3B1O75533 1304 aaKnown RBP eCLIP19.74■□□□□ 0.751e-7■■■■■ 172.3
PDLIM4-202ENST00000379018 FANCMQ8IYD8 2048 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 OTOGLQ3ZCN5 2332 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 GLRA2P23416 452 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 CREMQ03060 361 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 PCBP1Q15365 356 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 PSMD5Q16401 504 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 EARS2Q5JPH6 523 aaKnown RBP19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 FAM171A1Q5VUB5 890 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 SLC27A1Q6PCB7 646 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 LILRA6Q6PI73 481 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 RUBCNQ92622 972 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 EIF2AK1Q9BQI3 630 aaKnown RBP19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 ZSWIM6Q9HCJ5 1215 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 SPATA6Q9NWH7 488 aaPredicted RBP19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 FBXW11Q9UKB1 542 aa19.73■□□□□ 0.75
PDLIM4-202ENST00000379018 FRYLO94915 3013 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 LRRIQ4A6NIV6 560 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 TBX3O15119 743 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 USO1O60763 962 aaKnown RBP19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 SLITRK3O94933 977 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 C8AP07357 584 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 XBP1P17861 261 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 SPIRE1Q08AE8 756 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 SLFN12Q8IYM2 578 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 SHDQ96IW2 340 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 KXD1Q9BQD3 176 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 TTPALQ9BTX7 342 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 CDH7Q9ULB5 785 aa19.72■□□□□ 0.75
PDLIM4-202ENST00000379018 CEP250Q9BV73 2442 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 KINO60870 393 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 DGAT1O75907 488 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 KIF4AO95239 1232 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 LIG1P18858 919 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 SCRN1Q12765 414 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 FAM177A1Q8N128 213 aaPredicted RBP19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 ITFG1Q8TB96 612 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 PIGOQ8TEQ8 1089 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 ING5Q8WYH8 240 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 NAP1L4Q99733 375 aaKnown RBP19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 GPRC5CQ9NQ84 441 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 PDRG1Q9NUG6 133 aa19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 MTF2Q9Y483 593 aaPredicted RBP19.71■□□□□ 0.75
PDLIM4-202ENST00000379018 ADAM12O43184 909 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 LAMTOR5O43504 91 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 CDKL5O76039 1030 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 CD72P21854 359 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 ARL2P36404 184 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 FOSBP53539 338 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 NR5A1Q13285 461 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 TUSC3Q13454 348 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 PUM1Q14671 1186 aaKnown RBP eCLIP19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 MLF2Q15773 248 aaPredicted RBP19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 IFNLR1Q8IU57 520 aaPredicted RBP19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 SLC7A14Q8TBB6 771 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 FGF13Q92913 245 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 CLSTN3Q9BQT9 956 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 BCO2Q9BYV7 579 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 HCFC1R1Q9NWW0 138 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 NCDNQ9UBB6 729 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 GPR179Q6PRD1 2367 aa19.7■□□□□ 0.74
PDLIM4-202ENST00000379018 KANSL1LA0AUZ9 987 aa19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 XYLBO75191 536 aa19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 STARD6P59095 220 aa19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 CSTF1Q05048 431 aaKnown RBP19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 CALCRLQ16602 461 aa19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 RSPO4Q2I0M5 234 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 MTSS1LQ765P7 747 aa19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 MAML2Q8IZL2 1156 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 SNTG2Q9NY99 539 aa19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 USP20Q9Y2K6 914 aa19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 ZFP37Q9Y6Q3 630 aaPredicted RBP19.69■□□□□ 0.74
PDLIM4-202ENST00000379018 A0A1B0GUA9 196 aa19.68■□□□□ 0.74
PDLIM4-202ENST00000379018 FAM170BA6NMN3 283 aa19.68■□□□□ 0.74
PDLIM4-202ENST00000379018 PAPLNO95428 1278 aa19.68■□□□□ 0.74
PDLIM4-202ENST00000379018 HNRNPA1P09651 372 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDLIM4-202ENST00000379018 RARRES1P49788 294 aa19.68■□□□□ 0.74
PDLIM4-202ENST00000379018 POU5F1BQ06416 359 aa19.68■□□□□ 0.74
PDLIM4-202ENST00000379018 SLC44A4Q53GD3 710 aa19.68■□□□□ 0.74
PDLIM4-202ENST00000379018 GPR65Q8IYL9 337 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms