RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 MUM1L1Q5H9M0 696 aa22.56■■□□□ 1.2
SKI-201ENST00000378536 VSIG1Q86XK7 387 aa22.56■■□□□ 1.2
SKI-201ENST00000378536 EFCAB13Q8IY85 973 aa22.56■■□□□ 1.2
SKI-201ENST00000378536 KRT10P13645 584 aa22.56■■□□□ 1.2
SKI-201ENST00000378536 NPTX2P47972 431 aa22.56■■□□□ 1.2
SKI-201ENST00000378536 NOP14P78316 857 aaKnown RBP22.56■■□□□ 1.2
SKI-201ENST00000378536 NFRKBQ6P4R8 1299 aa22.56■■□□□ 1.2
SKI-201ENST00000378536 CYP2W1Q8TAV3 490 aa22.56■■□□□ 1.2
SKI-201ENST00000378536 LCP1P13796 627 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 GNGT1P63211 74 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 KCNJ6P48051 423 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 CLCN3P51790 818 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 COG7P83436 770 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 CCDC62Q6P9F0 684 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 GIMAP7Q8NHV1 300 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 MAGED2Q9UNF1 606 aaPredicted RBP22.55■■□□□ 1.2
SKI-201ENST00000378536 AFG3L2Q9Y4W6 797 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 HGSO14964 777 aaPredicted RBP22.55■■□□□ 1.2
SKI-201ENST00000378536 TADA2AO75478 443 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 GMNNO75496 209 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 CYP2C8P10632 490 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 CATSPERGQ6ZRH7 1159 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 PDIK1LQ8N165 341 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 TRPM4Q8TD43 1214 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 SART1O43290 800 aaKnown RBP22.55■■□□□ 1.2
SKI-201ENST00000378536 MSH2P43246 934 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 GABPB1Q06547 395 aaPredicted RBP22.55■■□□□ 1.2
SKI-201ENST00000378536 SPATA2LQ8IUW3 424 aaPredicted RBP22.55■■□□□ 1.2
SKI-201ENST00000378536 CAMKK2Q96RR4 588 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 ZMYND15Q9H091 742 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 SLC8A2Q9UPR5 921 aa22.55■■□□□ 1.2
SKI-201ENST00000378536 CD44P16070 742 aaKnown RBP22.54■■□□□ 1.2
SKI-201ENST00000378536 SV2CQ496J9 727 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 GLB1LQ6UWU2 654 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 SLC5A5Q92911 643 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 KLC2Q9H0B6 622 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 ZNF211Q13398 564 aaPredicted RBP22.54■■□□□ 1.2
SKI-201ENST00000378536 LY6KQ17RY6 165 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 C18orf8Q96DM3 657 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 HEY1Q9Y5J3 304 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 CREB3O43889 395 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 CIB2O75838 187 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 NME3Q13232 169 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 BBS9Q3SYG4 887 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 EFHC2Q5JST6 749 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 CENPUQ71F23 418 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 GRID2IPA4D2P6 1211 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 GUCY2CP25092 1073 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 ERVK-9P63128 1117 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 ERVK-24P63145 666 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 ANKRD20A3Q5VUR7 823 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 FAF2Q96CS3 445 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 ZNF131P52739 623 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 PLCB4Q15147 1175 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 KLHDC7AQ5VTJ3 777 aa22.54■■□□□ 1.2
SKI-201ENST00000378536 DLG5Q8TDM6 1919 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 BTBD8Q5XKL5 378 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 RILPQ96NA2 401 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 ERGIC2Q96RQ1 377 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 ADORA2AP29274 412 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.53■■□□□ 1.21e-6■■□□□ 14.2
SKI-201ENST00000378536 NIF3L1Q9GZT8 377 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 THOC5Q13769 683 aaKnown RBP22.53■■□□□ 1.2
SKI-201ENST00000378536 KRT3P12035 628 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 KLRC1P26715 233 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 THPOP40225 353 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 KCTD16Q68DU8 428 aa22.53■■□□□ 1.2
SKI-201ENST00000378536 SLC1A1P43005 524 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 KLK7P49862 253 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 RAPH1Q70E73 1250 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 OTOP1Q7RTM1 612 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 CPA5Q8WXQ8 436 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 WDR35Q9P2L0 1181 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 PACSIN2Q9UNF0 486 aaPredicted RBP22.52■■□□□ 1.2
SKI-201ENST00000378536 OGTO15294 1046 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 CYP3A4P08684 503 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 GRIK1P39086 918 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 VEPH1Q14D04 833 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 CAPS2Q9BXY5 557 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 A1CFQ9NQ94 594 aaKnown RBP22.52■■□□□ 1.2
SKI-201ENST00000378536 AFDNP55196 1824 aaKnown RBP22.52■■□□□ 1.2
SKI-201ENST00000378536 ILDR1Q86SU0 546 aaPredicted RBP22.52■■□□□ 1.2
SKI-201ENST00000378536 CDR2LQ86X02 465 aaPredicted RBP22.52■■□□□ 1.2
SKI-201ENST00000378536 PCDHB2Q9Y5E7 798 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 SLC4A1P02730 911 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 GYPCP04921 128 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 EPHB1P54762 984 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 TC2NQ8N9U0 490 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 PCSK9Q8NBP7 692 aaKnown RBP22.52■■□□□ 1.2
SKI-201ENST00000378536 SLC30A5Q8TAD4 765 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 VTA1Q9NP79 307 aa22.52■■□□□ 1.2
SKI-201ENST00000378536 ZNF720Q7Z2F6 126 aa22.51■■□□□ 1.19
SKI-201ENST00000378536 WDR18Q9BV38 432 aa22.51■■□□□ 1.19
SKI-201ENST00000378536 NT5C1AQ9BXI3 368 aa22.51■■□□□ 1.19
SKI-201ENST00000378536 PFDN4Q9NQP4 134 aa22.51■■□□□ 1.19
SKI-201ENST00000378536 KLHL8Q9P2G9 620 aaPredicted RBP22.51■■□□□ 1.19
SKI-201ENST00000378536 UVRAGQ9P2Y5 699 aa22.51■■□□□ 1.19
SKI-201ENST00000378536 NFU1Q9UMS0 254 aa22.51■■□□□ 1.19
SKI-201ENST00000378536 SF3A3Q12874 501 aaKnown RBP eCLIP22.51■■□□□ 1.192e-6■■□□□ 13.8
SKI-201ENST00000378536 SEPT6Q14141 434 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms