RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 XXYLT1Q8NBI6 393 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 PPP1R36Q96LQ0 422 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 TRIM51Q9BSJ1 452 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 CXorf56Q9H5V9 222 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 MED14O60244 1454 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ARHGDIAP52565 204 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ALDH18A1P54886 795 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 FRA10AC1Q70Z53 315 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ADGRF4Q8IZF3 695 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 STAG2Q8N3U4 1231 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 RAPGEF5Q92565 580 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 LIMA1Q9UHB6 759 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 NEO1Q92859 1461 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 A0A1W2PQC6 194 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 SYCE1LA8MT33 242 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 STXBP3O00186 592 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 TDP2O95551 362 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 CALB1P05937 261 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ASNSP08243 561 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 SDE2Q6IQ49 451 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ZNF711Q9Y462 761 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ZCCHC11Q5TAX3 1644 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ERFP50548 548 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ATP2C1P98194 919 aaPredicted RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 SYCP2LQ5T4T6 812 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 OTULINQ96BN8 352 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 NR1H4Q96RI1 486 aaPredicted RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 SNX12Q9UMY4 172 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 FAM47DPA6NHR8 397 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 PHF20L1A8MW92 1017 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 M0QYV0 167 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 PRDX5P30044 214 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 AP1B1Q10567 949 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 AGR3Q8TD06 166 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 CEP95Q96GE4 821 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 YME1L1Q96TA2 773 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 PCDHB7Q9Y5E2 793 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 NR2E3Q9Y5X4 410 aa12.69□□□□□ -0.38
PCDHA9-201ENST00000378122 ADGRL3Q9HAR2 1447 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 HADHAP40939 763 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 RIN2Q8WYP3 895 aaPredicted RBP12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 ING2Q9H160 280 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 CUL3Q13618 768 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 LONRF1Q17RB8 773 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 MAP1SQ66K74 1059 aaPredicted RBP12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 ANO5Q75V66 913 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 RHPN2Q8IUC4 686 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 SEC16BQ96JE7 1060 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 CCT8L2Q96SF2 557 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 VIPAS39Q9H9C1 493 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 DBR1Q9UK59 544 aaKnown RBP12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 DHX34Q14147 1143 aaKnown RBP12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 STXBP2Q15833 593 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 OR2W6PQ8NHA6 318 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 NCAPD2Q15021 1401 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 HECW2Q9P2P5 1572 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 PPP1R37O75864 691 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 ENO1P06733 434 aaKnown RBP12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 TRIM49P0CI25 452 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 TRIM49CP0CI26 452 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 KLK7P49862 253 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 MTMR2Q13614 643 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 EFTUD2Q15029 972 aaKnown RBP eCLIP12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 MXD3Q9BW11 206 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 ADAM33Q9BZ11 813 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 CYP26B1Q9NR63 512 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 A0A1B0GTH6 734 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 TSPY1Q01534 308 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 TMEM154Q6P9G4 183 aa12.68□□□□□ -0.38
PCDHA9-201ENST00000378122 ARHGEF37A1IGU5 675 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 TADA2AO75478 443 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 GGPS1O95749 300 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 VEPH1Q14D04 833 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 LRIG3Q6UXM1 1119 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 AGPAT1Q99943 283 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 FSD1LQ9BXM9 530 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 RPAP3Q9H6T3 665 aaPredicted RBP12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 ARHGEF40Q8TER5 1519 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 GOLGA8RI6L899 631 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 MAFGO15525 162 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 E2F6O75461 281 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 HNRNPCP07910 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 MYBL1P10243 752 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 ARSEP51690 589 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 ARMCX2Q7L311 632 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 RNPC3Q96LT9 517 aaKnown RBP12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 ENO4A6NNW6 628 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 MAN1A2O60476 641 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 PQBP1O60828 265 aaKnown RBP12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 DPYDQ12882 1025 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 RBBP7Q16576 425 aa12.67□□□□□ -0.38
PCDHA9-201ENST00000378122 DTX3LQ8TDB6 740 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms