RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 MRC1P22897 1456 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 CFAP69A5D8W1 941 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 PRPSAP2O60256 369 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 CAMTA2O94983 1202 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 GDF11O95390 407 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FECHP22830 423 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 SFNP31947 248 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ARL1P40616 181 aaPredicted RBP9.31□□□□□ -0.92
PCDH9-202ENST00000377865 HIF1AQ16665 826 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 MCPH1Q8NEM0 835 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 RBM15Q96T37 977 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCDH9-202ENST00000377865 HAUS8Q9BT25 410 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FAM205AQ6ZU69 1335 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 A0A0U1RQJ8 604 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 CLDN3O15551 220 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 TTC4O95801 387 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ZBED1O96006 694 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FAM153BP0C7A2 387 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 MUTP22033 750 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ARSEP51690 589 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 ITGA8P53708 1063 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 PSMD6Q15008 389 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FAM153CQ494X1 144 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 KSR1Q8IVT5 923 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 CYTH2Q99418 400 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 TSSK1BQ9BXA7 367 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 PACSIN1Q9BY11 444 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 TRIM15Q9C019 465 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 POLD4Q9HCU8 107 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 FAM153AQ9UHL3 310 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 GGT7Q9UJ14 662 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 TRIM33Q9UPN9 1127 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 PIK3C2AO00443 1686 aa9.31□□□□□ -0.92
PCDH9-202ENST00000377865 GOLGA8SH3BPF8 625 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 KCNA3P22001 575 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 AP3M2P53677 418 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 P3H1Q32P28 736 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 GRAMD1BQ3KR37 738 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 EARS2Q5JPH6 523 aaKnown RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 BSPRYQ5W0U4 402 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 WDR59Q6PJI9 974 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 CRELD2Q6UXH1 353 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 RGS9BPQ6ZS82 235 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 BZW1Q7L1Q6 419 aaKnown RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 GPD1LQ8N335 351 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 PROCA1Q8NCQ7 364 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ICA1LQ8NDH6 482 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 LXNQ9BS40 222 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 TLR3O15455 904 aaKnown RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF189O75820 626 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 MX2P20592 715 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 NMT1P30419 496 aaKnown RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 TMEM119Q4V9L6 283 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 KIAA0825Q8IV33 1275 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 EPS8L3Q8TE67 593 aaKnown RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ASNSD1Q9NWL6 643 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 TACC3Q9Y6A5 838 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF335Q9H4Z2 1342 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 UBR1Q8IWV7 1749 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 MAGEA13PA6NCF6 341 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 PDE2AO00408 941 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 CYP26A1O43174 497 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 SPAG6O75602 509 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 SRGAP2BP0DMP2 458 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 SCP2P22307 547 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 GNA15P30679 374 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 MAGEA4P43358 317 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 CC2D2BQ6DHV5 1058 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF571Q7Z3V5 609 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 FUKQ8N0W3 1084 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 KIF2BQ8N4N8 673 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 SLC7A3Q8WY07 619 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 C11orf70Q9BRQ4 267 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 FEM1BQ9UK73 627 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 RIC1Q4ADV7 1423 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 GIPC1O14908 333 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 NCF2P19878 526 aaPredicted RBP9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ART3Q13508 389 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 CUL3Q13618 768 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 WASHC2DQ5SRD0 308 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 NSL1Q96IY1 281 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 MSTO1Q9BUK6 570 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 CALN1Q9BXU9 219 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ZWILCHQ9H900 591 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 HSPBP1Q9NZL4 362 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 ZFATQ9P243 1243 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 C15orf41Q9Y2V0 281 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 KPNA7A9QM74 516 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 SLC37A4O43826 429 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 AKR1B1P15121 316 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 CYP11B2P19099 503 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 PPP4CP60510 307 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 KRT76Q01546 638 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 TNFAIP1Q13829 316 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 HIC1Q14526 733 aa9.3□□□□□ -0.92
PCDH9-202ENST00000377865 MAGEC3Q8TD91 643 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms