RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 KDM4FA0A1W2PPD8 638 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 P4HA2O15460 535 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 PNMA6AP0CW24 399 aaPredicted RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 UCHL3P15374 230 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 EPHX2P34913 555 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 DHX35Q9H5Z1 703 aaKnown RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 DNAJC17Q9NVM6 304 aaKnown RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 NNMTP40261 264 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 LIG3P49916 1009 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 ZNF211Q13398 564 aaPredicted RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 ZKSCAN8Q15776 578 aaPredicted RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 ITPRIPL1Q6GPH6 555 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 RRP15Q9Y3B9 282 aaKnown RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 KRT38O76015 456 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 ACTR2P61160 394 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 SEC23AQ15436 765 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 SLC18A3Q16572 532 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 TTC19Q6DKK2 380 aaPredicted RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 SRRM1Q8IYB3 904 aaKnown RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 EXOC4Q96A65 974 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 PPP1R9AQ9ULJ8 1098 aa18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 ARHGEF28Q8N1W1 1705 aaKnown RBP18.99■□□□□ 0.63
CLSTN1-202ENST00000377298 FAM187AA6NFU0 413 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 FCGRTP55899 365 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 NME3Q13232 169 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 CFAP61Q8NHU2 1237 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 DPF2Q92785 391 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 IFT43Q96FT9 208 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 UVRAGQ9P2Y5 699 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 DDTLA6NHG4 134 aaPredicted RBP18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 CCDC38Q502W7 563 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 ZC2HC1CQ53FD0 456 aaPredicted RBP18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 GNASQ5JWF2 1037 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 NFRKBQ6P4R8 1299 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 SPATA2LQ8IUW3 424 aaPredicted RBP18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 TXNDC9O14530 226 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 TOM1L1O75674 476 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 SREBF1P36956 1147 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 PPP1R12CQ9BZL4 782 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 CASQ2O14958 399 aaPredicted RBP18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 PLSCR1O15162 318 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 NR1D1P20393 614 aa18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 TCF7P36402 384 aaPredicted RBP18.98■□□□□ 0.63
CLSTN1-202ENST00000377298 EXTL3O43909 919 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 MAP2K2P36507 400 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 RGS2P41220 211 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 TMEM8AQ9HCN3 771 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 ITGA4P13612 1032 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 NPEPPSP55786 919 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 NBPF9Q3BBW0 867 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 KCNJ6P48051 423 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 CDH6P55285 790 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 NR1H3Q13133 447 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 ATG16L1Q676U5 607 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 C3orf67Q6ZVT6 689 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 TRIM59Q8IWR1 403 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 UNC45AQ9H3U1 944 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 ROR1Q01973 937 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 TADA2BQ86TJ2 420 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 NCK2O43639 380 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 SLC37A4O43826 429 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 CCT5P48643 541 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 KLHL38Q2WGJ6 581 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 ADGRA1Q86SQ6 560 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 LRRC71Q8N4P6 559 aa18.97■□□□□ 0.63
CLSTN1-202ENST00000377298 TCRBV5S4A2TA0A5A2 114 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 LCP1P13796 627 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 NR1I3Q14994 352 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 RBBP8NLQ8NC74 664 aaPredicted RBP18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 SCG3Q8WXD2 468 aaKnown RBP18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 TADA2AO75478 443 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 MOCS2O96007 188 aaPredicted RBP18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 HOXA10P31260 410 aaPredicted RBP18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 GLB1LQ6UWU2 654 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 IRAK4Q9NWZ3 460 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 SALL3Q9BXA9 1300 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 TAC1P20366 129 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 SERPINB6P35237 376 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 SATB1Q01826 763 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 PLEKHH3Q7Z736 793 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 TTC30AQ86WT1 665 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 LBHD1Q9BQE6 289 aaPredicted RBP18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 PLAAQ9Y263 795 aa18.96■□□□□ 0.63
CLSTN1-202ENST00000377298 NOTUMQ6P988 496 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 PPP2R3CQ969Q6 453 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 EPAS1Q99814 870 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 SP110Q9HB58 689 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 HLA-DRAP01903 254 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 VCAM1P19320 739 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 NBPF12Q5TAG4 269 aaPredicted RBP18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 CEP120Q8N960 986 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 MED15Q96RN5 788 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 DDX50Q9BQ39 737 aaKnown RBP18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 SIK2Q9H0K1 926 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 DDX47Q9H0S4 455 aaKnown RBP18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 RIOX1Q9H6W3 641 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 GBA2Q9HCG7 927 aaPredicted RBP18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 BFARQ9NZS9 450 aa18.95■□□□□ 0.62
CLSTN1-202ENST00000377298 CHEK2O96017 543 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms