RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TMOD1P28289 359 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 CASP1P29466 404 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 LAMTOR4Q0VGL1 99 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 MTF1Q14872 753 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 KARSQ15046 597 aaKnown RBP13.52□□□□□ -0.25
VRK3-202ENST00000377011 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 SMYD4Q8IYR2 804 aaPredicted RBP13.52□□□□□ -0.25
VRK3-202ENST00000377011 HNRNPLLQ8WVV9 542 aaKnown RBP13.52□□□□□ -0.25
VRK3-202ENST00000377011 BSNDQ8WZ55 320 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
VRK3-202ENST00000377011 DHTKD1Q96HY7 919 aaPredicted RBP13.52□□□□□ -0.25
VRK3-202ENST00000377011 ARFGAP3Q9NP61 516 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 KBTBD4Q9NVX7 518 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 CALCOCO1Q9P1Z2 691 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 KIAA1024Q9UPX6 916 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 USP20Q9Y2K6 914 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.25
VRK3-202ENST00000377011 BRWD1Q9NSI6 2320 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 LGALS16A8MUM7 142 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 PSMA7O14818 248 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 DGKIO75912 1065 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 FGFR1P11362 822 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 ATF7P17544 494 aaPredicted RBP13.51□□□□□ -0.25
VRK3-202ENST00000377011 GLRA2P23416 452 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 CCT6AP40227 531 aaKnown RBP13.51□□□□□ -0.25
VRK3-202ENST00000377011 PLA2G4AP47712 749 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 CAPSQ13938 189 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 PAN2Q504Q3 1202 aaKnown RBP13.51□□□□□ -0.25
VRK3-202ENST00000377011 SNX29Q8TEQ0 813 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 SLC7A3Q8WY07 619 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 PPM1EQ8WY54 764 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 SCLT1Q96NL6 688 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 YME1L1Q96TA2 773 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 BLZF1Q9H2G9 400 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 TUFT1Q9NNX1 390 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 RGS18Q9NS28 235 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 ANKEF1Q9NU02 776 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 INSL6Q9Y581 213 aa13.51□□□□□ -0.25
VRK3-202ENST00000377011 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 EDN1P05305 212 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 ARL2P36404 184 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 RFC5P40937 340 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 UBA7P41226 1012 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 PRCPP42785 496 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 GRB10Q13322 594 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 CCDC85BQ15834 202 aaPredicted RBP13.5□□□□□ -0.25
VRK3-202ENST00000377011 OTUD6AQ7L8S5 288 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 MSANTD4Q8NCY6 345 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 NEK9Q8TD19 979 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 BICDL2A1A5D9 508 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 GPR182O15218 404 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 RPLP2P05387 115 aaKnown RBP13.5□□□□□ -0.25
VRK3-202ENST00000377011 IGFBP4P22692 258 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 ERVK-21P61565 698 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 NAALADL2Q58DX5 795 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 FAM114A1Q8IWE2 563 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 RNF149Q8NC42 400 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 DNAJC7Q99615 494 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 NAPGQ99747 312 aaPredicted RBP13.5□□□□□ -0.25
VRK3-202ENST00000377011 NUP58Q9BVL2 599 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 BHMT2Q9H2M3 363 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 RAB21Q9UL25 225 aa13.5□□□□□ -0.25
VRK3-202ENST00000377011 MRPL42Q9Y6G3 142 aaKnown RBP13.5□□□□□ -0.25
VRK3-202ENST00000377011 DENND3A2RUS2 1198 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 B4GALT5O43286 388 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 KLRC4O43908 158 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 DKC1O60832 514 aaKnown RBP eCLIP13.49□□□□□ -0.256e-11■■■■■ 26.8
VRK3-202ENST00000377011 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 DNM2P50570 870 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 AFF1P51825 1210 aaKnown RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 FAM189BP81408 668 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 PDIA5Q14554 519 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 PADI6Q6TGC4 694 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 CDR2LQ86X02 465 aaPredicted RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 OR8K1Q8NGG5 319 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 MAFAQ8NHW3 353 aaPredicted RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 CPLX3Q8WVH0 158 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 PSPC1Q8WXF1 523 aaKnown RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 LPPQ93052 612 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 KIFC3Q9BVG8 833 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 RUSC1Q9BVN2 902 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 GCOM2Q9BZD3 368 aaPredicted RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 POLR3FQ9H1D9 316 aaPredicted RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 LZTFL1Q9NQ48 299 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 TAB2Q9NYJ8 693 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
VRK3-202ENST00000377011 MTCH2Q9Y6C9 303 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 ADGRA3Q8IWK6 1321 aa13.49□□□□□ -0.25
VRK3-202ENST00000377011 ERLIN1O75477 346 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 CSPG5O95196 566 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 KRT9P35527 623 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 ARHGAP25P42331 645 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 AMPD3Q01432 767 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 UBXN1Q04323 297 aa13.48□□□□□ -0.25
VRK3-202ENST00000377011 AMHR2Q16671 573 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms