RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 AP3B1O00203 1094 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 RPSAP08865 295 aaKnown RBP11.65□□□□□ -0.54
MDC1-201ENST00000376406 ESRRAP11474 423 aaPredicted RBP11.65□□□□□ -0.54
MDC1-201ENST00000376406 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
MDC1-201ENST00000376406 SNX17Q15036 470 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 HSP90AA5PQ58FG0 334 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 SWSAP1Q6NVH7 229 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 RHOT1Q8IXI2 618 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 FAM196BA6NMK8 535 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 IL18RAPO95256 599 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 TFDP2Q14188 446 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 PACSIN2Q9UNF0 486 aaPredicted RBP11.65□□□□□ -0.54
MDC1-201ENST00000376406 COPEO14579 308 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 NKRFO15226 690 aaKnown RBP eCLIP11.65□□□□□ -0.54
MDC1-201ENST00000376406 FKBP1AP62942 108 aaKnown RBP11.65□□□□□ -0.54
MDC1-201ENST00000376406 KIAA1755Q5JYT7 1200 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 NLRP14Q86W24 1093 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 SUPT20HL2P0C7V6 817 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.541e-6■■■■□ 23.7
MDC1-201ENST00000376406 TRIM55Q9BYV6 548 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 DNAJC17Q9NVM6 304 aaKnown RBP11.65□□□□□ -0.54
MDC1-201ENST00000376406 TC2NQ8N9U0 490 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 PPP1R16BQ96T49 567 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 FAM96AQ9H5X1 160 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 POLIQ9UNA4 740 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 ANGPTL3Q9Y5C1 460 aa11.65□□□□□ -0.54
MDC1-201ENST00000376406 FAM205CA6NFA0 338 aa11.65□□□□□ -0.55
MDC1-201ENST00000376406 PLSCR1O15162 318 aa11.65□□□□□ -0.55
MDC1-201ENST00000376406 HBP1O60381 514 aa11.65□□□□□ -0.55
MDC1-201ENST00000376406 CHGBP05060 677 aa11.65□□□□□ -0.55
MDC1-201ENST00000376406 EFHD1Q9BUP0 239 aa11.65□□□□□ -0.55
MDC1-201ENST00000376406 SHPRHQ149N8 1683 aa11.65□□□□□ -0.55
MDC1-201ENST00000376406 VGLL3A8MV65 326 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 PMLP29590 882 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 DAGLBQ8NCG7 672 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 SEPT1Q8WYJ6 367 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 TRIM4Q9C037 500 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 APEX2Q9UBZ4 518 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 GPR75-ASB3A0A0A6YYF3 556 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 LRIG3Q6UXM1 1119 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
MDC1-201ENST00000376406 NUDCD1Q96RS6 583 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 EIF3DO15371 548 aaKnown RBP eCLIP11.64□□□□□ -0.55
MDC1-201ENST00000376406 CYBBP04839 570 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 KRT17Q04695 432 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 ART3Q13508 389 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 STKLD1Q8NE28 680 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 FBXL13Q8NEE6 735 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 CHP1Q99653 195 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 DDX47Q9H0S4 455 aaKnown RBP11.64□□□□□ -0.55
MDC1-201ENST00000376406 DYRK4Q9NR20 520 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 BAG5Q9UL15 447 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 KRT38O76015 456 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 ZNF211Q13398 564 aaPredicted RBP11.64□□□□□ -0.55
MDC1-201ENST00000376406 CDC42EP5Q6NZY7 148 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.64□□□□□ -0.55
MDC1-201ENST00000376406 ENGASEQ8NFI3 743 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 C17orf75Q9HAS0 396 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 MAD2L2Q9UI95 211 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 NCF2P19878 526 aaPredicted RBP11.64□□□□□ -0.55
MDC1-201ENST00000376406 TAF11Q15544 211 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 SPOPLQ6IQ16 392 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 GLB1LQ6UWU2 654 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 GBA2Q9HCG7 927 aaPredicted RBP11.64□□□□□ -0.55
MDC1-201ENST00000376406 PDHBP11177 359 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 ITPK1Q13572 414 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 C11orf70Q9BRQ4 267 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 RBAKQ9NYW8 714 aaPredicted RBP11.64□□□□□ -0.55
MDC1-201ENST00000376406 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
MDC1-201ENST00000376406 ZNF185O15231 689 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 KRT14P02533 472 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 APOEP02649 317 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 C6orf222P0C671 652 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 HIBCHQ6NVY1 386 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 THNSL1Q8IYQ7 743 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 SYN2Q92777 582 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 LSM7Q9UK45 103 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 TADA2AO75478 443 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 MYCP01106 439 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 TFRCP02786 760 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 SKIV2LQ15477 1246 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 EDRF1Q3B7T1 1238 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 REEP2Q9BRK0 252 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 EPC1Q9H2F5 836 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 SCOCQ9UIL1 159 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 DCDC2CA8MYV0 355 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 TAF1BQ53T94 588 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 USP50Q70EL3 339 aaPredicted RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 GLYCTKQ8IVS8 523 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 PARD3BQ8TEW8 1205 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 RNPC3Q96LT9 517 aaKnown RBP11.63□□□□□ -0.55
MDC1-201ENST00000376406 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
MDC1-201ENST00000376406 TRIM15Q9C019 465 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms