RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 SLC18A3Q16572 532 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 PHLDB3Q6NSJ2 640 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 TSPAN18Q96SJ8 248 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 SYT11Q9BT88 431 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 TUBB2BQ9BVA1 445 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 NLRC4Q9NPP4 1024 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 LUC7LQ9NQ29 371 aaKnown RBP12.04□□□□□ -0.48
PDPN-202ENST00000376057 RAB20Q9NX57 234 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 RNF186Q9NXI6 227 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 SRRDQ9UH36 339 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 SCN10AQ9Y5Y9 1956 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 B4GALT4O60513 344 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 GPR32O75388 356 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 AXLP30530 894 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 GCLMP48507 274 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 SPA17Q15506 151 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 SV2AQ7L0J3 742 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 APBB1IPQ7Z5R6 666 aaPredicted RBP12.04□□□□□ -0.48
PDPN-202ENST00000376057 MTG1Q9BT17 334 aaPredicted RBP12.04□□□□□ -0.48
PDPN-202ENST00000376057 INO80BQ9C086 356 aaPredicted RBP12.04□□□□□ -0.48
PDPN-202ENST00000376057 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 RBAKQ9NYW8 714 aaPredicted RBP12.04□□□□□ -0.48
PDPN-202ENST00000376057 INTUQ9ULD6 942 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 EVPLQ92817 2033 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 ANK1P16157 1881 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 ARHGEF6Q15052 776 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 DNTTIP2Q5QJE6 756 aaKnown RBP12.03□□□□□ -0.48
PDPN-202ENST00000376057 KLHDC9Q8NEP7 349 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 ZNF516Q92618 1163 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 ZBTB45Q96K62 511 aaPredicted RBP12.03□□□□□ -0.48
PDPN-202ENST00000376057 DESI2Q9BSY9 194 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 KAT6AQ92794 2004 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 RALGAPA2Q2PPJ7 1873 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 A0A1B0GUA9 196 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 MFAP3P55082 362 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 PRKCZQ05513 592 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 KLHL30Q0D2K2 578 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 RAPGEF1Q13905 1077 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 BMS1Q14692 1282 aaKnown RBP12.03□□□□□ -0.48
PDPN-202ENST00000376057 NT5DC4Q86YG4 428 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 ACRBPQ8NEB7 543 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 SLC30A5Q8TAD4 765 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 FNBP1Q96RU3 617 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 FAM124BQ9H5Z6 455 aaPredicted RBP12.03□□□□□ -0.48
PDPN-202ENST00000376057 MINDY3Q9H8M7 445 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 AKT3Q9Y243 479 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 PCDHA13Q9Y5I0 950 aa12.03□□□□□ -0.48
PDPN-202ENST00000376057 A0A087WZ62 844 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 ZNF263O14978 683 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 KRT86O43790 486 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 ADAMTS4O75173 837 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 IQCF3P0C7M6 154 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 GTF2F1P35269 517 aaKnown RBP eCLIP12.02□□□□□ -0.48
PDPN-202ENST00000376057 IGBP1P78318 339 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 CACNB2Q08289 660 aaPredicted RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 DRAP1Q14919 205 aaPredicted RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 CCSAPQ6IQ19 270 aaPredicted RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 PAXIP1Q6ZW49 1069 aaPredicted RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 CD302Q8IX05 232 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 FAM71AQ8IYT1 594 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 RNF10Q8N5U6 811 aaKnown RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 HELQQ8TDG4 1101 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 SHC3Q92529 594 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 CALR3Q96L12 384 aaKnown RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 NLRP4Q96MN2 994 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 FDXACB1Q9BRP7 624 aaPredicted RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 GCOM2Q9BZD3 368 aaPredicted RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 L2HGDHQ9H9P8 463 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 SETD4Q9NVD3 440 aa12.02□□□□□ -0.48
PDPN-202ENST00000376057 AJAP1Q9UKB5 411 aaPredicted RBP12.02□□□□□ -0.48
PDPN-202ENST00000376057 C17orf102A2RUQ5 167 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 KIF5CO60282 957 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 CLTAP09496 248 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 APBA1Q02410 837 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 PTPN11Q06124 597 aaPredicted RBP12.02□□□□□ -0.49
PDPN-202ENST00000376057 DCAF4L1Q3SXM0 396 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 TAF2Q6P1X5 1199 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 VPS36Q86VN1 386 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 ERO1AQ96HE7 468 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 NT5C1BQ96P26 610 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 PDZD7Q9H5P4 517 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 CNTN6Q9UQ52 1028 aa12.02□□□□□ -0.49
PDPN-202ENST00000376057 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 INO80B-WBP1J3KQ70 363 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 AKR1B10O60218 316 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 HMGCRP04035 888 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 PLEKP08567 350 aaPredicted RBP12.01□□□□□ -0.49
PDPN-202ENST00000376057 MYL3P08590 195 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 RARBP10826 455 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 TAF4BQ92750 862 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 SEMA4DQ92854 862 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 CDT1Q9H211 546 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 DEF6Q9H4E7 631 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 ASB7Q9H672 318 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 TSPAN1O60635 241 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
PDPN-202ENST00000376057 ACOT2P49753 483 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms