RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CARSP49589 748 aaKnown RBP15.04■□□□□ -0
MSH5-202ENST00000375740 EPHB4P54760 987 aa15.04■□□□□ -0
MSH5-202ENST00000375740 TNNC1P63316 161 aa15.04■□□□□ -0
MSH5-202ENST00000375740 XKR3Q5GH77 459 aa15.04■□□□□ -0
MSH5-202ENST00000375740 CCDC13Q8IYE1 715 aa15.04■□□□□ -0
MSH5-202ENST00000375740 CHST13Q8NET6 341 aa15.04■□□□□ -0
MSH5-202ENST00000375740 FBXL18Q96ME1 805 aa15.04■□□□□ -0
MSH5-202ENST00000375740 POLR3FQ9H1D9 316 aaPredicted RBP15.04■□□□□ -0
MSH5-202ENST00000375740 ESYT3A0FGR9 886 aa15.04■□□□□ -0
MSH5-202ENST00000375740 OPA1O60313 960 aa15.04■□□□□ -0
MSH5-202ENST00000375740 FTLP02792 175 aaPredicted RBP15.04■□□□□ -0
MSH5-202ENST00000375740 RTP1P59025 263 aa15.04■□□□□ -0
MSH5-202ENST00000375740 SEPT14Q6ZU15 432 aa15.04■□□□□ -0
MSH5-202ENST00000375740 TAS1R3Q7RTX0 852 aa15.04■□□□□ -0
MSH5-202ENST00000375740 FAM228AQ86W67 206 aa15.04■□□□□ -0
MSH5-202ENST00000375740 TMC2Q8TDI7 906 aa15.04■□□□□ -0
MSH5-202ENST00000375740 ZNF473Q8WTR7 871 aaKnown RBP15.04■□□□□ -0
MSH5-202ENST00000375740 IFT81Q8WYA0 676 aa15.04■□□□□ -0
MSH5-202ENST00000375740 IFT74Q96LB3 600 aa15.04■□□□□ -0
MSH5-202ENST00000375740 AP1M1Q9BXS5 423 aa15.04■□□□□ -0
MSH5-202ENST00000375740 TMEM8AQ9HCN3 771 aa15.04■□□□□ -0
MSH5-202ENST00000375740 COG5Q9UP83 839 aa15.04■□□□□ -0
MSH5-202ENST00000375740 WDR90Q96KV7 1748 aa15.04■□□□□ -0
MSH5-202ENST00000375740 MYH9P35579 1960 aaKnown RBP15.03■□□□□ -0
MSH5-202ENST00000375740 HNRNPDLO14979 420 aaKnown RBP15.03■□□□□ -0
MSH5-202ENST00000375740 RAD51CO43502 376 aa15.03■□□□□ -0
MSH5-202ENST00000375740 RDXP35241 583 aaKnown RBP15.03■□□□□ -0
MSH5-202ENST00000375740 EMBQ6PCB8 327 aa15.03■□□□□ -0
MSH5-202ENST00000375740 FAM71AQ8IYT1 594 aa15.03■□□□□ -0
MSH5-202ENST00000375740 ZNF526Q8TF50 670 aaPredicted RBP15.03■□□□□ -0
MSH5-202ENST00000375740 FAXDC2Q96IV6 333 aa15.03■□□□□ -0
MSH5-202ENST00000375740 PCDHB18PQ96TA0 734 aa15.03■□□□□ -0
MSH5-202ENST00000375740 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■□□□ 13.4
MSH5-202ENST00000375740 MAF1Q9H063 256 aa15.03■□□□□ -0
MSH5-202ENST00000375740 SLC40A1Q9NP59 571 aa15.03■□□□□ -0
MSH5-202ENST00000375740 ACP6Q9NPH0 428 aa15.03■□□□□ -0
MSH5-202ENST00000375740 BTBD7Q9P203 1132 aa15.03■□□□□ -0
MSH5-202ENST00000375740 COQ4Q9Y3A0 265 aa15.03■□□□□ -0
MSH5-202ENST00000375740 ZNF233A6NK53 670 aa15.03■□□□□ -0
MSH5-202ENST00000375740 PGRMC1O00264 195 aaKnown RBP15.03■□□□□ -0
MSH5-202ENST00000375740 CYP26A1O43174 497 aa15.03■□□□□ -0
MSH5-202ENST00000375740 FAM153BP0C7A2 387 aa15.03■□□□□ -0
MSH5-202ENST00000375740 CHRNB2P17787 502 aa15.03■□□□□ -0
MSH5-202ENST00000375740 MFAP3P55082 362 aa15.03■□□□□ -0
MSH5-202ENST00000375740 CYP24A1Q07973 514 aa15.03■□□□□ -0
MSH5-202ENST00000375740 FAM153CQ494X1 144 aa15.03■□□□□ -0
MSH5-202ENST00000375740 BRDTQ58F21 947 aaPredicted RBP15.03■□□□□ -0
MSH5-202ENST00000375740 LBX2Q6XYB7 198 aa15.03■□□□□ -0
MSH5-202ENST00000375740 NOP9Q86U38 636 aaKnown RBP15.03■□□□□ -0
MSH5-202ENST00000375740 CEP57Q86XR8 500 aa15.03■□□□□ -0
MSH5-202ENST00000375740 RASGEF1CQ8N431 466 aa15.03■□□□□ -0
MSH5-202ENST00000375740 DNERQ8NFT8 737 aa15.03■□□□□ -0
MSH5-202ENST00000375740 ELMO3Q96BJ8 720 aa15.03■□□□□ -0
MSH5-202ENST00000375740 BICD1Q96G01 975 aa15.03■□□□□ -0
MSH5-202ENST00000375740 ISCUQ9H1K1 167 aa15.03■□□□□ -0
MSH5-202ENST00000375740 ZNF302Q9NR11 478 aa15.03■□□□□ -0
MSH5-202ENST00000375740 DDX20Q9UHI6 824 aaKnown RBP15.03■□□□□ -0
MSH5-202ENST00000375740 FAM153AQ9UHL3 310 aa15.03■□□□□ -0
MSH5-202ENST00000375740 NFU1Q9UMS0 254 aa15.03■□□□□ -0
MSH5-202ENST00000375740 NOC2LQ9Y3T9 749 aaKnown RBP15.03■□□□□ -0
MSH5-202ENST00000375740 DDNO94850 711 aaPredicted RBP15.02■□□□□ -0
MSH5-202ENST00000375740 ICAM3P32942 547 aa15.02■□□□□ -0
MSH5-202ENST00000375740 PRPF4BQ13523 1007 aaKnown RBP15.02■□□□□ -0
MSH5-202ENST00000375740 TRADDQ15628 312 aa15.02■□□□□ -0
MSH5-202ENST00000375740 GPD1LQ8N335 351 aa15.02■□□□□ -0
MSH5-202ENST00000375740 HELQQ8TDG4 1101 aa15.02■□□□□ -0
MSH5-202ENST00000375740 TAS1R2Q8TE23 839 aa15.02■□□□□ -0
MSH5-202ENST00000375740 CASKIN2Q8WXE0 1202 aa15.02■□□□□ -0
MSH5-202ENST00000375740 CAVIN3Q969G5 261 aa15.02■□□□□ -0
MSH5-202ENST00000375740 TMEM143Q96AN5 459 aa15.02■□□□□ -0
MSH5-202ENST00000375740 CCT8L2Q96SF2 557 aa15.02■□□□□ -0
MSH5-202ENST00000375740 RUFY1Q96T51 708 aa15.02■□□□□ -0
MSH5-202ENST00000375740 FAM213AQ9BRX8 229 aa15.02■□□□□ -0
MSH5-202ENST00000375740 EPN3Q9H201 632 aa15.02■□□□□ -0
MSH5-202ENST00000375740 MAFBQ9Y5Q3 323 aaPredicted RBP15.02■□□□□ -0
MSH5-202ENST00000375740 SYNGAP1Q96PV0 1343 aa15.02■□□□□ -0
MSH5-202ENST00000375740 ATG7O95352 703 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 DLATP10515 647 aaKnown RBP15.02□□□□□ -0.01
MSH5-202ENST00000375740 GARTP22102 1010 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 GPC3P51654 580 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 POLGP54098 1239 aaPredicted RBP15.02□□□□□ -0.01
MSH5-202ENST00000375740 SATB1Q01826 763 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 EMC2Q15006 297 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 SV2AQ7L0J3 742 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 SLC47A2Q86VL8 602 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 PROCA1Q8NCQ7 364 aaPredicted RBP15.02□□□□□ -0.01
MSH5-202ENST00000375740 FBXL13Q8NEE6 735 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 EPS8L1Q8TE68 723 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 SHC3Q92529 594 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 SLC24A3Q9HC58 644 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 RAB20Q9NX57 234 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 ARHGAP28Q9P2N2 729 aa15.02□□□□□ -0.01
MSH5-202ENST00000375740 NOCTQ9UK39 431 aaKnown RBP15.02□□□□□ -0.01
MSH5-202ENST00000375740 KRIT1O00522 736 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 DDX3YO15523 660 aaKnown RBP15.01□□□□□ -0.01
MSH5-202ENST00000375740 HSF2BPO75031 334 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 ALDH5A1P51649 535 aaPredicted RBP15.01□□□□□ -0.01
MSH5-202ENST00000375740 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.01□□□□□ -0.01
MSH5-202ENST00000375740 RTN2O75298 545 aa15.01□□□□□ -0.01
MSH5-202ENST00000375740 ITGA4P13612 1032 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms