RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LOC102724159A0A0B4J2E5 919 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 PALM3A6NDB9 673 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 FAM47DPA6NHR8 397 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 TTC36A6NLP5 189 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SLC26A4O43511 780 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 KIF1CO43896 1103 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SASH3O75995 380 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SDC4P31431 198 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 PLCB4Q15147 1175 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 PWP2Q15269 919 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SEC23AQ15436 765 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 ARMCX2Q7L311 632 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 TPCN2Q8NHX9 752 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 ERP27Q96DN0 273 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 NBPF3Q9H094 633 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 ALG13Q9NP73 1137 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 SUGT1Q9Y2Z0 365 aa12.24□□□□□ -0.45
PTCH1-203ENST00000375274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 BAZ2BQ9UIF8 2168 aaKnown RBP12.24□□□□□ -0.45
PTCH1-203ENST00000375274 NTSR2O95665 410 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 NFIXQ14938 502 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 LMBRD2Q68DH5 695 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 LDHDQ86WU2 507 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 BTBD6Q96KE9 485 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 RNF146Q9NTX7 359 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 GOLGA8RI6L899 631 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 NDUFB10O96000 172 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 OATP04181 439 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 OCRLQ01968 901 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 C4orf33Q8N1A6 199 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 VPS39Q96JC1 886 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 PABPC3Q9H361 631 aaKnown RBP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 JMJD4Q9H9V9 463 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 PCDHA10Q9Y5I2 948 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 CCDC195A0A1B0GUA6 201 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 CCDC22O60826 627 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 KRT10P13645 584 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 GRB10Q13322 594 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 P3H1Q32P28 736 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 ZNF568Q3ZCX4 644 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 NT5DC1Q5TFE4 455 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 ANKMY2Q8IV38 441 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 PSPC1Q8WXF1 523 aaKnown RBP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 ABTB1Q969K4 478 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 WWP1Q9H0M0 922 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 SPC25Q9HBM1 224 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 KLHL8Q9P2G9 620 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 KPNA7A9QM74 516 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 ADRA2BP18089 450 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 PHEXP78562 749 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 SATB1Q01826 763 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 STXBP2Q15833 593 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 SUPT20HL1Q3ZLR7 823 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 AGGF1Q8N302 714 aaeCLIP12.23□□□□□ -0.45
PTCH1-203ENST00000375274 ATP6V1E2Q96A05 226 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 MAD2L2Q9UI95 211 aa12.23□□□□□ -0.45
PTCH1-203ENST00000375274 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 ADAMTS13Q76LX8 1427 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 HNRNPCL1O60812 293 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 COPB2P35606 906 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 BBS5Q8N3I7 341 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CCDC138Q96M89 665 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 MTRQ99707 1265 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SUDS3Q9H7L9 328 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SPDYE16A6NNV3 312 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 YWHABP31946 246 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 PGM1P36871 562 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 RABGAP1LQ5R372 815 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 RGS9BPQ6ZS82 235 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 KIF2BQ8N4N8 673 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 HAUS8Q9BT25 410 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 OSBPL8Q9BZF1 889 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 NEU2Q9Y3R4 380 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 RASSF10A6NK89 507 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CYP11B2P19099 503 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 EEF1B2P24534 225 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CASP2P42575 452 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CDH6P55285 790 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 COPS2P61201 443 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 ROR1Q01973 937 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 MAPK7Q13164 816 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 GJB7Q6PEY0 223 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 RFX8Q6ZV50 586 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 MYLK4Q86YV6 388 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CCDC124Q96CT7 223 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 FAM167AQ96KS9 214 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 TMEM117Q9H0C3 514 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 POLR3FQ9H1D9 316 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 ANLNQ9NQW6 1124 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 KCND2Q9NZV8 630 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 HERC5Q9UII4 1024 aaKnown RBP12.22□□□□□ -0.45
PTCH1-203ENST00000375274 SLC37A4O43826 429 aa12.22□□□□□ -0.45
PTCH1-203ENST00000375274 CCND1P24385 295 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms