RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 EIF3HO15372 352 aaKnown RBP eCLIP13.15□□□□□ -0.32e-11■■■□□ 17.1
UBR4-203ENST00000375225 DDX3YO15523 660 aaKnown RBP13.15□□□□□ -0.3
UBR4-203ENST00000375225 NR3C2P08235 984 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 ZBTB48P10074 688 aaPredicted RBP13.15□□□□□ -0.3
UBR4-203ENST00000375225 NPTX2P47972 431 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 ERVK-9P63128 1117 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 GNGT1P63211 74 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 MRPS25P82663 173 aaKnown RBP13.15□□□□□ -0.3
UBR4-203ENST00000375225 DR1Q01658 176 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 BRDTQ58F21 947 aaPredicted RBP13.15□□□□□ -0.3
UBR4-203ENST00000375225 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 MICALCLQ6ZW33 695 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 ZNF677Q86XU0 584 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 GPD1LQ8N335 351 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 PPM1KQ8N3J5 372 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 TMEM161BQ8NDZ6 487 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 FBXL13Q8NEE6 735 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 SEC14L1Q92503 715 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 ATP6V1G3Q96LB4 118 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 OSGEPQ9NPF4 335 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
UBR4-203ENST00000375225 ESYT3A0FGR9 886 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 EBAG9O00559 213 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 SLC25A27O95847 323 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 MYBL1P10243 752 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 CNGA1P29973 690 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 CTNNA1P35221 906 aaKnown RBP13.14□□□□□ -0.31
UBR4-203ENST00000375225 GJA5P36382 358 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 IRAK1P51617 712 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 DRG2P55039 364 aaKnown RBP13.14□□□□□ -0.31
UBR4-203ENST00000375225 STRN3Q13033 797 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
UBR4-203ENST00000375225 WDR44Q5JSH3 913 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 AGBL2Q5U5Z8 902 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 B4GALNT4Q76KP1 1039 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 ARHGEF19Q8IW93 802 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 SHC3Q92529 594 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 BICD1Q96G01 975 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 HINFPQ9BQA5 517 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 PAGR1Q9BTK6 254 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 DDX47Q9H0S4 455 aaKnown RBP13.14□□□□□ -0.31
UBR4-203ENST00000375225 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 JPH1Q9HDC5 661 aaPredicted RBP13.14□□□□□ -0.31
UBR4-203ENST00000375225 GABBR1Q9UBS5 961 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 MTRF1LQ9UGC7 380 aaKnown RBP13.14□□□□□ -0.31
UBR4-203ENST00000375225 GTF3C4Q9UKN8 822 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 ALG6Q9Y672 507 aa13.14□□□□□ -0.31
UBR4-203ENST00000375225 ZNF233A6NK53 670 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 ZEB2O60315 1214 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 PHF2O75151 1096 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 LDHAP00338 332 aaKnown RBP13.13□□□□□ -0.31
UBR4-203ENST00000375225 FAM153BP0C7A2 387 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 NR1D1P20393 614 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 CTNNA2P26232 953 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 DLG4P78352 724 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 CDR2Q01850 454 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 GCNT1Q02742 428 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 MOGSQ13724 837 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 TTMPQ5BVD1 217 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 XKR3Q5GH77 459 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 SLFN12LQ6IEE8 588 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 GPAT2Q6NUI2 795 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 SRLQ86TD4 932 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 PARD3BQ8TEW8 1205 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 UBLCP1Q8WVY7 318 aaPredicted RBP13.13□□□□□ -0.31
UBR4-203ENST00000375225 FBXL18Q96ME1 805 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 FMO2Q99518 471 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 SPATC1LQ9H0A9 340 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 C1orf112Q9NSG2 853 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 RAB20Q9NX57 234 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 BTBD7Q9P203 1132 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 AMACRQ9UHK6 382 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 RSPH14Q9UHP6 348 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 RRP15Q9Y3B9 282 aaKnown RBP13.13□□□□□ -0.31
UBR4-203ENST00000375225 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 HNRNPDLO14979 420 aaKnown RBP13.13□□□□□ -0.31
UBR4-203ENST00000375225 SPOPO43791 374 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 MAN1A1P33908 653 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 HSD17B3P37058 310 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
UBR4-203ENST00000375225 CYP24A1Q07973 514 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 CCL15Q16663 113 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 UGCGQ16739 394 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 PLA2G4FQ68DD2 849 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 NCAPG2Q86XI2 1143 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 ANKRD35Q8N283 1001 aa13.13□□□□□ -0.31
UBR4-203ENST00000375225 EPS8L1Q8TE68 723 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms