RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PENKP01210 267 aaPredicted RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 WEE2P0C1S8 567 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 P4HA1P13674 534 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 CRKP46108 304 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 RPP30P78346 268 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 PTK2BQ14289 1009 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SF3B4Q15427 424 aaKnown RBP eCLIP8.48□□□□□ -1.057e-7■■■■□ 20.9
USP48-203ENST00000374732 BCL2A1Q16548 175 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SUPT20HL1Q3ZLR7 823 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 INTS11Q5TA45 600 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 PLEKHM3Q6ZWE6 761 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 EXOC3L1Q86VI1 746 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SPATA24Q86W54 205 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 GLYCTKQ8IVS8 523 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SIRT2Q8IXJ6 389 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 CADM3Q8N126 398 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 PRICKLE1Q96MT3 831 aaPredicted RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 WASH6PQ9NQA3 447 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 KBTBD4Q9NVX7 518 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 DDX20Q9UHI6 824 aaKnown RBP8.48□□□□□ -1.05
USP48-203ENST00000374732 ERVK-19Q9WJR5 959 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 FHOD1Q9Y613 1164 aa8.48□□□□□ -1.05
USP48-203ENST00000374732 SMNDC1O75940 238 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP48-203ENST00000374732 THEGLP0DJG4 465 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 MYL4P12829 197 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 GSK3AP49840 483 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 YARSP54577 528 aaKnown RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 TEAD4Q15561 434 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 VPS36Q86VN1 386 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 CCDC50Q8IVM0 306 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 MAGEB6Q8N7X4 407 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 GLRX2Q9NS18 164 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP48-203ENST00000374732 SENP1Q9P0U3 644 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 SEC63Q9UGP8 760 aaKnown RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 TMCO1Q9UM00 188 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 L1RE1Q9UN81 338 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 IBTKQ9P2D0 1353 aaPredicted RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 CCDC78A2IDD5 438 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 INO80B-WBP1J3KQ70 363 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 PPEF1O14829 653 aaPredicted RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 PMM2O15305 246 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 GOSR1O95249 250 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 CAPNS1P04632 268 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 CYP3A4P08684 503 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 CYP2A6P11509 494 aaPredicted RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 MX2P20592 715 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 AXLP30530 894 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 ZAP70P43403 619 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 ZNF445P59923 1031 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 MTMR1Q13613 665 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 KLC3Q6P597 504 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 GALNTL5Q7Z4T8 443 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 ANKRD44Q8N8A2 993 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 MYCBPAPQ8TBZ2 947 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 OTUD7AQ8TE49 926 aaPredicted RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 SLC2A13Q96QE2 648 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 AIFM2Q9BRQ8 373 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 CALN1Q9BXU9 219 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 PARVBQ9HBI1 364 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 RPRD1BQ9NQG5 326 aaKnown RBP8.47□□□□□ -1.05
USP48-203ENST00000374732 TRPM5Q9NZQ8 1165 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 USP20Q9Y2K6 914 aa8.47□□□□□ -1.05
USP48-203ENST00000374732 KIF28PB7ZC32 967 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 H3BRJ5 948 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 GOLGA8RI6L899 631 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 TRDMT1O14717 391 aaKnown RBP8.46□□□□□ -1.05
USP48-203ENST00000374732 IL10P22301 178 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 TKTP29401 623 aaKnown RBP8.46□□□□□ -1.05
USP48-203ENST00000374732 DDIT3P35638 169 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 NPTX2P47972 431 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 CDC16Q13042 620 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 PIN1Q13526 163 aaPredicted RBP8.46□□□□□ -1.05
USP48-203ENST00000374732 WHAMMP3Q1A5X7 153 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 ERCC6LQ2NKX8 1250 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 SIGIRRQ6IA17 410 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 TMEM214Q6NUQ4 689 aaKnown RBP8.46□□□□□ -1.05
USP48-203ENST00000374732 PRR23CQ6ZRP0 262 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 CEP97Q8IW35 865 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 CSGALNACT2Q8N6G5 542 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 CCDC63Q8NA47 563 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 LILRB4Q8NHJ6 448 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 FBXO27Q8NI29 283 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 PRR7Q8TB68 274 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 MAIP1Q8WWC4 291 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 TNFRSF25Q93038 417 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 EGLN2Q96KS0 407 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 CCDC42Q96M95 316 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 BCL7BQ9BQE9 202 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 IFT80Q9P2H3 777 aaPredicted RBP8.46□□□□□ -1.05
USP48-203ENST00000374732 TRHDEQ9UKU6 1024 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 NOVA2Q9UNW9 492 aaKnown RBP8.46□□□□□ -1.05
USP48-203ENST00000374732 ZNF148Q9UQR1 794 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 GPR52Q9Y2T5 361 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.46□□□□□ -1.05
USP48-203ENST00000374732 SBF2Q86WG5 1849 aa8.46□□□□□ -1.05
USP48-203ENST00000374732 GMNNO75496 209 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 ATP5HO75947 161 aa8.46□□□□□ -1.06
USP48-203ENST00000374732 TFEBP19484 476 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms