RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 FAM26DQ5JW98 314 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 SLFN12LQ6IEE8 588 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 POMGNT1Q8WZA1 660 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 EEF2KMTQ96G04 330 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 SLC9A7Q96T83 725 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 ACO2Q99798 780 aaKnown RBP19.11■□□□□ 0.65
PFDN6-201ENST00000374606 CBWD1Q9BRT8 395 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 HSD3B7Q9H2F3 369 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 USP20Q9Y2K6 914 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 TRANK1O15050 2925 aa19.11■□□□□ 0.65
PFDN6-201ENST00000374606 TTLL13PA6NNM8 815 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 KIAA0391O15091 583 aaKnown RBP19.1■□□□□ 0.65
PFDN6-201ENST00000374606 SLC16A3O15427 465 aaKnown RBP19.1■□□□□ 0.65
PFDN6-201ENST00000374606 EXOC3O60645 756 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 GNA14O95837 355 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 ZNF18P17022 549 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 FGFR4P22455 802 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 MRE11P49959 708 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 ZNF568Q3ZCX4 644 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 ZNF618Q5T7W0 954 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 MPZL3Q6UWV2 235 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 TSHZ1Q6ZSZ6 1077 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 DEFB128Q7Z7B8 93 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 ANKRD20A12PQ8NF67 263 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 CNOT6LQ96LI5 555 aaKnown RBP19.1■□□□□ 0.65
PFDN6-201ENST00000374606 LRFN3Q9BTN0 628 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 PCIF1Q9H4Z3 704 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 CERS4Q9HA82 394 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 HSPBP1Q9NZL4 362 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 TNFSF13BQ9Y275 285 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 STYXL1Q9Y6J8 313 aa19.1■□□□□ 0.65
PFDN6-201ENST00000374606 SCN5AQ14524 2016 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 N4BP3O15049 544 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 RPS6KA5O75582 802 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 EPB41P11171 864 aaKnown RBP19.09■□□□□ 0.65
PFDN6-201ENST00000374606 ATP1A3P13637 1013 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 ARF4P18085 180 aaPredicted RBP19.09■□□□□ 0.65
PFDN6-201ENST00000374606 CDK11BP21127 795 aaKnown RBP19.09■□□□□ 0.65
PFDN6-201ENST00000374606 ADSSP30520 456 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 AXLP30530 894 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 RFC2P35250 354 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 HSP90AA2PQ14568 343 aaPredicted RBP19.09■□□□□ 0.65
PFDN6-201ENST00000374606 NOLC1Q14978 699 aaKnown RBP eCLIP19.09■□□□□ 0.65
PFDN6-201ENST00000374606 CCDC40Q4G0X9 1142 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 TMEM31Q5JXX7 168 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 XXYLT1Q8NBI6 393 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 TMEM174Q8WUU8 243 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 TCHPQ9BT92 498 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 MKNK1Q9BUB5 465 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 MSTO1Q9BUK6 570 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 EPHX3Q9H6B9 360 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 AGPAT5Q9NUQ2 364 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 DMAC2Q9NW81 257 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 FRMD4BQ9Y2L6 1034 aa19.09■□□□□ 0.65
PFDN6-201ENST00000374606 NOC2LQ9Y3T9 749 aaKnown RBP19.09■□□□□ 0.65
PFDN6-201ENST00000374606 EPOPA6NHQ4 379 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 PITPNM1O00562 1244 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 CLDN3O15551 220 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 HARSP12081 509 aaKnown RBP19.08■□□□□ 0.64
PFDN6-201ENST00000374606 SELPP16109 830 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 PROZP22891 400 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 EEF1GP26641 437 aaKnown RBP19.08■□□□□ 0.64
PFDN6-201ENST00000374606 PLCB2Q00722 1185 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 FBXO47Q5MNV8 452 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 NOTUMQ6P988 496 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 LRRC8DQ7L1W4 858 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 APBB1IPQ7Z5R6 666 aaPredicted RBP19.08■□□□□ 0.64
PFDN6-201ENST00000374606 FILIP1Q7Z7B0 1213 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 FAM228AQ86W67 206 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 IRF2BP1Q8IU81 584 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 CREBRFQ8IUR6 639 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 PHOSPHO2Q8TCD6 241 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 SAAL1Q96ER3 474 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 CPB2Q96IY4 423 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 ZBTB45Q96K62 511 aaPredicted RBP19.08■□□□□ 0.64
PFDN6-201ENST00000374606 ADPGKQ9BRR6 497 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 PDZD7Q9H5P4 517 aa19.08■□□□□ 0.64
PFDN6-201ENST00000374606 PIN4Q9Y237 131 aaKnown RBP19.08■□□□□ 0.64
PFDN6-201ENST00000374606 A0A0B4J269 797 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 AKAP3O75969 853 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 GHRP10912 638 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 PSMC2P35998 433 aaKnown RBP19.07■□□□□ 0.64
PFDN6-201ENST00000374606 MTIF2P46199 727 aaKnown RBP19.07■□□□□ 0.64
PFDN6-201ENST00000374606 CASP4P49662 377 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 MCL1Q07820 350 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 PAK2Q13177 524 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 TCP11X2Q5H9J9 407 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 EEF1DP3Q658K8 133 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 TRAF7Q6Q0C0 670 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 ZBTB33Q86T24 672 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 FAM186BQ8IYM0 893 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 GPD1LQ8N335 351 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 ARNTL2Q8WYA1 636 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 HLA-CQ95604 372 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 AGO2Q9UKV8 859 aaKnown RBP19.07■□□□□ 0.64
PFDN6-201ENST00000374606 SQORQ9Y6N5 450 aa19.07■□□□□ 0.64
PFDN6-201ENST00000374606 GOLGA8IPA6NC78 632 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms