RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 KIF3CO14782 793 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 DYNC1LI2O43237 492 aaPredicted RBP16.98■□□□□ 0.31
HDAC8-209ENST00000373589 C4BPAP04003 597 aaKnown RBP16.98■□□□□ 0.31
HDAC8-209ENST00000373589 CYP2B6P20813 491 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 CYP2C19P33261 490 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 MATR3P43243 847 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC8-209ENST00000373589 MARCH8Q5T0T0 291 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 VPS36Q86VN1 386 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 RNF10Q8N5U6 811 aaKnown RBP16.98■□□□□ 0.31
HDAC8-209ENST00000373589 TRIM58Q8NG06 486 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 KAT5Q92993 513 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 MINDY3Q9H8M7 445 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 CDC23Q9UJX2 597 aa16.98■□□□□ 0.31
HDAC8-209ENST00000373589 CA12O43570 354 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 ZC3H11AO75152 810 aaKnown RBP eCLIP16.97■□□□□ 0.31
HDAC8-209ENST00000373589 CTGFP29279 349 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 PPFIA1Q13136 1202 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 PRPF4BQ13523 1007 aaKnown RBP16.97■□□□□ 0.31
HDAC8-209ENST00000373589 GRIK4Q16099 956 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 ALKBH5Q6P6C2 394 aaKnown RBP16.97■□□□□ 0.31
HDAC8-209ENST00000373589 BRSK2Q8IWQ3 736 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 ZNF668Q96K58 619 aaPredicted RBP16.97■□□□□ 0.31
HDAC8-209ENST00000373589 CARD6Q9BX69 1037 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 CAPN6Q9Y6Q1 641 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 PTPRJQ12913 1337 aa16.97■□□□□ 0.31
HDAC8-209ENST00000373589 ANO9A1A5B4 782 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 BTNL10A8MVZ5 291 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 INO80B-WBP1J3KQ70 363 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 TNPO2O14787 897 aaKnown RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 OGTO15294 1046 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 TACC1O75410 805 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 IQCF3P0C7M6 154 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 TNNI1P19237 187 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 TMOD1P28289 359 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 PHKA2P46019 1235 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 MFAP3P55082 362 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 NCBP1Q09161 790 aaKnown RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 NAA30Q147X3 362 aaPredicted RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 FAM187BQ17R55 369 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 KIAA0753Q2KHM9 967 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 TDRD10Q5VZ19 366 aaKnown RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 PAPD7Q5XG87 772 aaKnown RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 FAM71AQ8IYT1 594 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 LNX1Q8TBB1 728 aaPredicted RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 SHC3Q92529 594 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 NT5C1BQ96P26 610 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 CGRRF1Q99675 332 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 PACSIN1Q9BY11 444 aa16.96■□□□□ 0.31
HDAC8-209ENST00000373589 INO80BQ9C086 356 aaPredicted RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 GPBP1L1Q9HC44 474 aaPredicted RBP16.96■□□□□ 0.31
HDAC8-209ENST00000373589 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 B4GALT5O43286 388 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 MOCS3O95396 460 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 F2P00734 622 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 GRM1Q13255 1194 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 SEZ6Q53EL9 994 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 ATF7IP2Q5U623 682 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 LMBRD2Q68DH5 695 aaPredicted RBP16.96■□□□□ 0.3
HDAC8-209ENST00000373589 MPZL3Q6UWV2 235 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 TRAPPC11Q7Z392 1133 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 ZBTB33Q86T24 672 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 TLK2Q86UE8 772 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 PPM1KQ8N3J5 372 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 KAT2BQ92831 832 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 FAM84AQ96KN4 292 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 TCHPQ9BT92 498 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 PRMT7Q9NVM4 692 aaPredicted RBP16.96■□□□□ 0.3
HDAC8-209ENST00000373589 CPSF3Q9UKF6 684 aaKnown RBP16.96■□□□□ 0.3
HDAC8-209ENST00000373589 TNFSF13BQ9Y275 285 aa16.96■□□□□ 0.3
HDAC8-209ENST00000373589 EVPLQ92817 2033 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 A0A087WZ62 844 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 TULP1O00294 542 aaPredicted RBP16.95■□□□□ 0.3
HDAC8-209ENST00000373589 TADA3O75528 432 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 ATP1A1P05023 1023 aaKnown RBP16.95■□□□□ 0.3
HDAC8-209ENST00000373589 HARSP12081 509 aaKnown RBP16.95■□□□□ 0.3
HDAC8-209ENST00000373589 TNFSF9P41273 254 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 GCNT1Q02742 428 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 AMHR2Q16671 573 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 MNS1Q8NEH6 495 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 NOX5Q96PH1 765 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 FDXACB1Q9BRP7 624 aaPredicted RBP16.95■□□□□ 0.3
HDAC8-209ENST00000373589 INTUQ9ULD6 942 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 AKT3Q9Y243 479 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 Q9Y3F1 56 aa16.95■□□□□ 0.3
HDAC8-209ENST00000373589 ZSWIM8A7E2V4 1837 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 RRN3P2A6NIE6 340 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 ENC1O14682 589 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 VNN1O95497 513 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 HLA-DRAP01903 254 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 VTNP04004 478 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 ENOSF1Q7L5Y1 443 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 GLYCTKQ8IVS8 523 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 KIAA0319LQ8IZA0 1049 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 ANKRD7Q92527 254 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 TATDN2Q93075 761 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 LENG1Q96BZ8 264 aaPredicted RBP16.94■□□□□ 0.3
HDAC8-209ENST00000373589 FAM81BQ96LP2 452 aa16.94■□□□□ 0.3
HDAC8-209ENST00000373589 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.94■□□□□ 0.32e-6■■■■■ 226.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms