RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 OCM2P0CE71 109 aa10.47□□□□□ -0.73
TRERF1-204ENST00000372922 OCMP0CE72 109 aaPredicted RBP10.47□□□□□ -0.73
TRERF1-204ENST00000372922 YWHABP31946 246 aaKnown RBP10.47□□□□□ -0.73
TRERF1-204ENST00000372922 HMGCS2P54868 508 aa10.47□□□□□ -0.73
TRERF1-204ENST00000372922 RNF25Q96BH1 459 aaPredicted RBP10.47□□□□□ -0.73
TRERF1-204ENST00000372922 PARD6BQ9BYG5 372 aa10.47□□□□□ -0.73
TRERF1-204ENST00000372922 CPVLQ9H3G5 476 aa10.47□□□□□ -0.73
TRERF1-204ENST00000372922 TRPC7Q9HCX4 862 aa10.47□□□□□ -0.73
TRERF1-204ENST00000372922 CHCHD3Q9NX63 227 aaKnown RBP10.47□□□□□ -0.73
TRERF1-204ENST00000372922 STX18Q9P2W9 335 aaKnown RBP10.47□□□□□ -0.73
TRERF1-204ENST00000372922 AFF4Q9UHB7 1163 aaKnown RBP10.47□□□□□ -0.73
TRERF1-204ENST00000372922 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.73
TRERF1-204ENST00000372922 EN1Q05925 392 aaPredicted RBP10.46□□□□□ -0.73
TRERF1-204ENST00000372922 HACL1Q9UJ83 578 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 PLAAQ9Y263 795 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 SUPT3HO75486 399 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 PRKCBP05771 671 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 MTMR2Q13614 643 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 SNX17Q15036 470 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 TMEM259Q4ZIN3 620 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 NUGGCQ68CJ6 796 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 LPAR1Q92633 364 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 CAPN11Q9UMQ6 739 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 ZCCHC11Q5TAX3 1644 aaKnown RBP10.46□□□□□ -0.73
TRERF1-204ENST00000372922 PSMD3O43242 534 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 ORC4O43929 436 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 AARSP49588 968 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRERF1-204ENST00000372922 EFTUD2Q15029 972 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRERF1-204ENST00000372922 IER5Q5VY09 327 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 DDX42Q86XP3 938 aaKnown RBP eCLIP10.46□□□□□ -0.73
TRERF1-204ENST00000372922 OR6P1Q8NGX9 317 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 CHAMP1Q96JM3 812 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 ZNF668Q96K58 619 aaPredicted RBP10.46□□□□□ -0.73
TRERF1-204ENST00000372922 SMARCAD1Q9H4L7 1026 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 KIF17Q9P2E2 1029 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 SNX24Q9Y343 169 aa10.46□□□□□ -0.73
TRERF1-204ENST00000372922 A0A0G2JND7 137 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 FTLP02792 175 aaPredicted RBP10.46□□□□□ -0.74
TRERF1-204ENST00000372922 RNF149Q8NC42 400 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 SPAG7O75391 227 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 GGPS1O95749 300 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 ZNF157P51786 506 aaPredicted RBP10.46□□□□□ -0.74
TRERF1-204ENST00000372922 APPL2Q8NEU8 664 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 EML4Q9HC35 981 aaKnown RBP10.46□□□□□ -0.74
TRERF1-204ENST00000372922 CASS4Q9NQ75 786 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 PFASO15067 1338 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 TRIM49BA6NDI0 452 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 EFCAB14O75071 495 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 ATP5HO75947 161 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 IGKV5-2P06315 115 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 GFPT1Q06210 699 aaPredicted RBP10.46□□□□□ -0.74
TRERF1-204ENST00000372922 GPS1Q13098 491 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 MICALL2Q8IY33 904 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 SIX5Q8N196 739 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.74
TRERF1-204ENST00000372922 CNOT7Q9UIV1 285 aaKnown RBP10.46□□□□□ -0.74
TRERF1-204ENST00000372922 PCDHGB4Q9UN71 923 aa10.46□□□□□ -0.74
TRERF1-204ENST00000372922 CRB1P82279 1406 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 TMED10P49755 219 aaKnown RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 STRIP1Q5VSL9 837 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 CCNYL1Q8N7R7 359 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 NEDD1Q8NHV4 660 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 EYA4O95677 639 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 GH1P01241 217 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 GUCY2CP25092 1073 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 STILQ15468 1287 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 NR1H4Q96RI1 486 aaPredicted RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 CRAMP1Q96RY5 1269 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 PREX2Q70Z35 1606 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 TOB2Q14106 344 aaPredicted RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 GRAMD1BQ3KR37 738 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 FRMD5Q7Z6J6 570 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 PPHLN1Q8NEY8 458 aaKnown RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 CLCA2Q9UQC9 943 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 GRID2IPA4D2P6 1211 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 MCF2P10911 925 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 CHRNA3P32297 505 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 TPI1P60174 286 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 IRX1P78414 480 aaPredicted RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 HAUS6Q7Z4H7 955 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 ARHGAP18Q8N392 663 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 PPM1NQ8N819 430 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 FOPNLQ96NB1 174 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 CFAP69A5D8W1 941 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 SMAPO00193 183 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 SRGAP2O75044 1071 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 MAP4P27816 1152 aaKnown RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 SULT1E1P49888 294 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 EPHA10Q5JZY3 1008 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 MEI1Q5TIA1 1274 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 SNRNP27Q8WVK2 155 aaKnown RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 BPIFA3Q9BQP9 254 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 ISCA1Q9BUE6 129 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 EMSYQ7Z589 1322 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 GYG2O15488 501 aa10.45□□□□□ -0.74
TRERF1-204ENST00000372922 VCPP55072 806 aaKnown RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 HNRNPH2P55795 449 aaKnown RBP10.45□□□□□ -0.74
TRERF1-204ENST00000372922 RBP5P82980 135 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms