RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 RHBDL3P58872 404 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 PABPC4Q13310 644 aaKnown RBP eCLIP19.54■□□□□ 0.72
MMP9-201ENST00000372330 MOGSQ13724 837 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 RRP1BQ14684 758 aaKnown RBP19.54■□□□□ 0.72
MMP9-201ENST00000372330 DAB2IPQ5VWQ8 1189 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 RGS9BPQ6ZS82 235 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 ASCC2Q9H1I8 757 aaPredicted RBP19.54■□□□□ 0.72
MMP9-201ENST00000372330 ADGRA3Q8IWK6 1321 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 SYNGAP1Q96PV0 1343 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 CAPN9O14815 690 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 UCHL3P15374 230 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 SMARCA1P28370 1054 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 GNA11P29992 359 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 DEUP1Q05D60 604 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 PPATQ06203 517 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 ORC2Q13416 577 aaPredicted RBP19.54■□□□□ 0.72
MMP9-201ENST00000372330 SLC45A4Q5BKX6 768 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 MFSD14BQ5SR56 506 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 USP17L2Q6R6M4 530 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 ANKRD35Q8N283 1001 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 C7orf43Q8WVR3 580 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 RFFLQ8WZ73 363 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 C6orf50Q9HD87 102 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 ATAD5Q96QE3 1844 aa19.54■□□□□ 0.72
MMP9-201ENST00000372330 SMCO2A6NFE2 343 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 CCDC22O60826 627 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 SERPINB2P05120 415 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 CDK7P50613 346 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 NONOQ15233 471 aaKnown RBP eCLIP19.53■□□□□ 0.72
MMP9-201ENST00000372330 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 ZNF449Q6P9G9 518 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 SLF2Q8IX21 1173 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 CEP95Q96GE4 821 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 CRAMP1Q96RY5 1269 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 BLOC1S4Q9NUP1 217 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 DDX60LQ5H9U9 1706 aaKnown RBP19.53■□□□□ 0.72
MMP9-201ENST00000372330 NCANO14594 1321 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 ZWINTO95229 277 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 ECEL1O95672 775 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 ALAS1P13196 640 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 CALCOCO2Q13137 446 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 UBAP2Q5T6F2 1119 aaKnown RBP19.53■□□□□ 0.72
MMP9-201ENST00000372330 HS2ST1Q7LGA3 356 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 DYMQ7RTS9 669 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 NME8Q8N427 588 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 STMN2Q93045 179 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 LGALS13Q9UHV8 139 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 PHTF1Q9UMS5 762 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 TBC1D30Q9Y2I9 924 aa19.53■□□□□ 0.72
MMP9-201ENST00000372330 GAKO14976 1311 aa19.52■□□□□ 0.72
MMP9-201ENST00000372330 DDX3XO00571 662 aaKnown RBP eCLIP19.52■□□□□ 0.72
MMP9-201ENST00000372330 CCNT1O60563 726 aaKnown RBP19.52■□□□□ 0.72
MMP9-201ENST00000372330 PSMG1O95456 288 aa19.52■□□□□ 0.72
MMP9-201ENST00000372330 ALDH1B1P30837 517 aa19.52■□□□□ 0.72
MMP9-201ENST00000372330 NOVP48745 357 aa19.52■□□□□ 0.72
MMP9-201ENST00000372330 LETM2Q2VYF4 491 aa19.52■□□□□ 0.72
MMP9-201ENST00000372330 PHLDB3Q6NSJ2 640 aa19.52■□□□□ 0.72
MMP9-201ENST00000372330 C18orf8Q96DM3 657 aa19.52■□□□□ 0.72
MMP9-201ENST00000372330 CDC42EP4Q9H3Q1 356 aaKnown RBP19.52■□□□□ 0.72
MMP9-201ENST00000372330 TMEM253P0C7T8 217 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 VCAM1P19320 739 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 CTNNA2P26232 953 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 FOXN2P32314 431 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 COPB2P35606 906 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 TECP42680 631 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 GALCP54803 685 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 USP46P62068 366 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 KCNH2Q12809 1159 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 Q4G0T1 1027 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 ADAT2Q7Z6V5 191 aaKnown RBP19.52■□□□□ 0.71
MMP9-201ENST00000372330 NEK8Q86SG6 692 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 SLC35G2Q8TBE7 412 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 IRGQQ8WZA9 623 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 CDK5RAP3Q96JB5 506 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 IQCGQ9H095 443 aaKnown RBP19.52■□□□□ 0.71
MMP9-201ENST00000372330 NDUFA13Q9P0J0 144 aa19.52■□□□□ 0.71
MMP9-201ENST00000372330 TBX10O75333 385 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 BBOX1O75936 387 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 ASLP04424 464 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 PABPC4LP0CB38 370 aaKnown RBP19.51■□□□□ 0.71
MMP9-201ENST00000372330 GRB10Q13322 594 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 CCDC137Q6PK04 289 aaKnown RBP19.51■□□□□ 0.71
MMP9-201ENST00000372330 FAM47EQ6ZV65 393 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 KIAA0825Q8IV33 1275 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 RNF168Q8IYW5 571 aaPredicted RBP19.51■□□□□ 0.71
MMP9-201ENST00000372330 MIF4GDA9UHW6 222 aaKnown RBP19.51■□□□□ 0.71
MMP9-201ENST00000372330 INHBCP55103 352 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 LRRC41Q15345 812 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 ZC2HC1CQ53FD0 456 aaPredicted RBP19.51■□□□□ 0.71
MMP9-201ENST00000372330 PRELID2Q8N945 189 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 ZNF398Q8TD17 642 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 LENG1Q96BZ8 264 aaPredicted RBP19.51■□□□□ 0.71
MMP9-201ENST00000372330 BTBD10Q9BSF8 475 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 POLLQ9UGP5 575 aa19.51■□□□□ 0.71
MMP9-201ENST00000372330 FAM47DPA6NHR8 397 aa19.5■□□□□ 0.71
MMP9-201ENST00000372330 A8MXQ7 604 aa19.5■□□□□ 0.71
MMP9-201ENST00000372330 CDH16O75309 829 aa19.5■□□□□ 0.71
MMP9-201ENST00000372330 CBX6O95503 412 aa19.5■□□□□ 0.71
MMP9-201ENST00000372330 CYP1A1P04798 512 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms