RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PIK3AP1Q6ZUJ8 805 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 MAPKAPK5Q8IW41 473 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 SLC44A5Q8NCS7 719 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 BRINP2Q9C0B6 783 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 SAMSN1Q9NSI8 373 aaKnown RBP9.49□□□□□ -0.89
ATG4A-203ENST00000372232 UBAP1Q9NZ09 502 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 POLLQ9UGP5 575 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 MAD2L2Q9UI95 211 aa9.49□□□□□ -0.89
ATG4A-203ENST00000372232 MYH6P13533 1939 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 MROH7Q68CQ1 1323 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 MAGEA13PA6NCF6 341 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 H0YGN5 161 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TIMM44O43615 452 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 DNAJC6O75061 913 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 PEX11AO75192 247 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 MMEP08473 750 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 SPATA31D3P0C874 917 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 CALML3P27482 149 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 BTDP43251 543 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 APLP1P51693 650 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 CLCN2P51788 898 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 COPS2P61201 443 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 HERVK_113P62684 666 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TRIM14Q14142 442 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 BCL2A1Q16548 175 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF827Q17R98 1081 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 CCDC122Q5T0U0 273 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 SPATA31D4Q6ZUB0 917 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 RBBP8NLQ8NC74 664 aaPredicted RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TBC1D16Q8TBP0 767 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 PBKQ96KB5 322 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 MED15Q96RN5 788 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 SH3GLB2Q9NR46 395 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 ABCF3Q9NUQ8 709 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 CYP39A1Q9NYL5 469 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 SAP30BPQ9UHR5 308 aaKnown RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 RABL2BQ9UNT1 228 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 NFS1Q9Y697 457 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TNS1Q9HBL0 1735 aaKnown RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 KLRG2A4D1S0 409 aaPredicted RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TMEM110-MUSTN1A8MSY1 372 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TPPPO94811 219 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 FLT3P36888 993 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 CARSP49589 748 aaKnown RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 MTTPP55157 894 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 RASIP1Q5U651 963 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 C8orf74Q6P047 294 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 KLC3Q6P597 504 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 RNF10Q8N5U6 811 aaKnown RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 SH3TC2Q8TF17 1288 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 EDEM1Q92611 657 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 PAGE5Q96GU1 130 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF333Q96JL9 665 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 CTAGE1Q96RT6 745 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 NAP1L3Q99457 506 aaPredicted RBP9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TMEM47Q9BQJ4 181 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 NRDE2Q9H7Z3 1164 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 SPC25Q9HBM1 224 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF287Q9HBT7 754 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 TBCCD1Q9NVR7 557 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 PRR12Q9ULL5 1215 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 NFU1Q9UMS0 254 aa9.48□□□□□ -0.89
ATG4A-203ENST00000372232 FAM221BA6H8Z2 402 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 SIGLEC16A6NMB1 481 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 EIF1AYO14602 144 aaKnown RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 KRT86O43790 486 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 AKR1B10O60218 316 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 TJP3O95049 919 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 IDEP14735 1019 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 KCNA3P22001 575 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 GDF10P55107 478 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 GEMIN4P57678 1058 aaKnown RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 SLC35G1Q2M3R5 365 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 MFSD14BQ5SR56 506 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CCNJLQ8IV13 435 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 SCUBE1Q8IWY4 988 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 BLIDQ8IZY5 108 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 ANKK1Q8NFD2 765 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 PMM1Q92871 262 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 GATA6Q92908 595 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CLIP3Q96DZ5 547 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CSRNP1Q96S65 589 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 RETREG1Q9H6L5 497 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 ETNK2Q9NVF9 386 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 SAMD15Q9P1V8 674 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 PCDHA4Q9UN74 947 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 STX8Q9UNK0 236 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 STK38LQ9Y2H1 464 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 N6AMT1Q9Y5N5 214 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 BAZ2BQ9UIF8 2168 aaKnown RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CYTH3O43739 400 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 CYP1A1P04798 512 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 PORP16435 677 aaPredicted RBP9.47□□□□□ -0.89
ATG4A-203ENST00000372232 MCM7P33993 719 aa9.47□□□□□ -0.89
ATG4A-203ENST00000372232 IRS1P35568 1242 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms