RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 SIX2Q9NPC8 291 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 MSRAQ9UJ68 235 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 CAPN6Q9Y6Q1 641 aa15.28■□□□□ 0.04
LDB3-204ENST00000372066 SPDYE4A6NLX3 237 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 ENC1O14682 589 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 KRT13P13646 458 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 NCKAP1LP55160 1127 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 CCL23P55773 120 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 BFSP1Q12934 665 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 NAB2Q15742 525 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 CCDC70Q6NSX1 233 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 INTS8Q75QN2 995 aaKnown RBP15.27■□□□□ 0.03
LDB3-204ENST00000372066 IRF2BP2Q7Z5L9 587 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 USP38Q8NB14 1042 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 CAGE1Q8TC20 777 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 PPM1EQ8WY54 764 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 ATP6V0A1Q93050 837 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 ZFP91Q96JP5 570 aaPredicted RBP15.27■□□□□ 0.03
LDB3-204ENST00000372066 PKD2L1Q9P0L9 805 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 INTUQ9ULD6 942 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 TFR2Q9UP52 801 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.03
LDB3-204ENST00000372066 UMODL1Q5DID0 1318 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 B4GALT4O60513 344 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 EXOC3O60645 756 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 MOCS3O95396 460 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 NR3C2P08235 984 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 STAT1P42224 750 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 MCCD1P59942 119 aaPredicted RBP15.26■□□□□ 0.03
LDB3-204ENST00000372066 GTF2BQ00403 316 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 CETN1Q12798 172 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 OTUD6AQ7L8S5 288 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 OTOP2Q7RTS6 562 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 MORC4Q8TE76 937 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 PRDM12Q9H4Q4 367 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 MLXIPQ9HAP2 919 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 CXXC1Q9P0U4 656 aaPredicted RBP15.26■□□□□ 0.03
LDB3-204ENST00000372066 PCDHA10Q9Y5I2 948 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 DUSP10Q9Y6W6 482 aa15.26■□□□□ 0.03
LDB3-204ENST00000372066 PMM2O15305 246 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 ACTN1P12814 892 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 SCP2P22307 547 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 MYL7Q01449 175 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 RAB30Q15771 203 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 GNPTABQ3T906 1256 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 MAP9Q49MG5 647 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 DUSP28Q4G0W2 176 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 RPUSD2Q8IZ73 545 aaKnown RBP15.25■□□□□ 0.03
LDB3-204ENST00000372066 KIFAP3Q92845 792 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 STK33Q9BYT3 514 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 HDAC6Q9UBN7 1215 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 KCNG1Q9UIX4 513 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 PCDHGC5Q9Y5F6 944 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 DOCK5Q9H7D0 1870 aa15.25■□□□□ 0.03
LDB3-204ENST00000372066 A0A087X0T9 212 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 H0YCG3 227 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 FAM228BP0C875 321 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 CYP2J2P51589 502 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 ALDH5A1P51649 535 aaPredicted RBP15.24■□□□□ 0.03
LDB3-204ENST00000372066 SMTNP53814 917 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 ENPEPQ07075 957 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 LONRF2Q1L5Z9 754 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 OSBPL9Q96SU4 736 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 MMS19Q96T76 1030 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.24■□□□□ 0.03
LDB3-204ENST00000372066 NKX2-4Q9H2Z4 354 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 BCAS3Q9H6U6 928 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 EYSQ5T1H1 3165 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 SIP14410 1827 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 CDH23Q9H251 3354 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 A0A0A6YYK5 440 aaPredicted RBP15.24■□□□□ 0.03
LDB3-204ENST00000372066 CES2O00748 559 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 CCNE2O96020 404 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 PSAPP07602 524 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 MYL3P08590 195 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 PAFAH1B1P43034 410 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 PTK2Q05397 1052 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 XKR9Q5GH70 373 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 TJAP1Q5JTD0 557 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 HAUS6Q7Z4H7 955 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 MMGT1Q8N4V1 131 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 XXYLT1Q8NBI6 393 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 DNERQ8NFT8 737 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 SPIRE2Q8WWL2 714 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 EPC1Q9H2F5 836 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 SLC28A3Q9HAS3 691 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 PRDM6Q9NQX0 595 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 NENFQ9UMX5 172 aa15.24■□□□□ 0.03
LDB3-204ENST00000372066 BACH1O14867 736 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 ATP9AO75110 1047 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 SUPT20HL2P0C7V6 817 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 KCNA2P16389 499 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 IGFBP4P22692 258 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 SOX5P35711 763 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 GPS2Q13227 327 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 UGCGQ16739 394 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 KIAA0753Q2KHM9 967 aa15.23■□□□□ 0.03
LDB3-204ENST00000372066 HDXQ7Z353 690 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms