RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ALG6Q9Y672 507 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 NBPF26B4DH59 902 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 LCA5LO95447 670 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 ITGA8P53708 1063 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 ZNF200P98182 395 aaPredicted RBP12.48□□□□□ -0.41
PTPN1-201ENST00000371621 RARS2Q5T160 578 aaKnown RBP12.48□□□□□ -0.41
PTPN1-201ENST00000371621 DSTYKQ6XUX3 929 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 B3GNT6Q6ZMB0 384 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 NBPF15Q8N660 670 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.48□□□□□ -0.41
PTPN1-201ENST00000371621 APOBEC2Q9Y235 224 aaKnown RBP12.48□□□□□ -0.41
PTPN1-201ENST00000371621 DTNAQ9Y4J8 743 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 MYH10P35580 1976 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 E7ENQ6 273 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 COPEO14579 308 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 RIPK2O43353 540 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 DDHD2O94830 711 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 UCHL3P15374 230 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 MAP4P27816 1152 aaKnown RBP12.48□□□□□ -0.41
PTPN1-201ENST00000371621 ARHGAP4P98171 946 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 TRPC3Q13507 836 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 AUHQ13825 339 aaKnown RBP12.48□□□□□ -0.41
PTPN1-201ENST00000371621 RASA3Q14644 834 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 RFFLQ8WZ73 363 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 EME1Q96AY2 570 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 PGM2Q96G03 612 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 CCDC138Q96M89 665 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 BRD8Q9H0E9 1235 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 EURLQ9NYK6 297 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 SLC12A4Q9UP95 1085 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 A2ML1A8K2U0 1454 aa12.48□□□□□ -0.41
PTPN1-201ENST00000371621 MAN1A2O60476 641 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 TTLL1O95922 423 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 MYL2P10916 166 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 RARGP13631 454 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 RGS2P41220 211 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 RPL21P46778 160 aaKnown RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 DRAP1Q14919 205 aaPredicted RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 SATL1Q86VE3 508 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 NLRP10Q86W26 655 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 DCLK2Q8N568 766 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 RANBP17Q9H2T7 1088 aaKnown RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 WASF2Q9Y6W5 498 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 PPLO60437 1756 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 SETD1BQ9UPS6 1966 aaKnown RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 SRRM3A6NNA2 597 aaPredicted RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 ADCY6O43306 1168 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 NELFEP18615 380 aaKnown RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 GEN1Q17RS7 908 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 LPCAT2Q7L5N7 544 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 SGMS1Q86VZ5 419 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 NCAPG2Q86XI2 1143 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 FAM186BQ8IYM0 893 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 POU5F2Q8N7G0 328 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 KAZALD1Q96I82 304 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 HAUS8Q9BT25 410 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 SLC52A2Q9HAB3 445 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 NDUFB5O43674 189 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 GCP02774 474 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 ITGA2BP08514 1039 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
PTPN1-201ENST00000371621 UNC13DQ70J99 1090 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 BBOF1Q8ND07 529 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 GIMAP4Q9NUV9 329 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 ANAPC7Q9UJX3 599 aa12.47□□□□□ -0.41
PTPN1-201ENST00000371621 RNF103-CHMP3A0A140T963 221 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 MEI4A8MW99 385 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 PHF2O75151 1096 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 GPS1Q13098 491 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 MYBPC3Q14896 1274 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 RFWD3Q6PCD5 774 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 TMC5Q6UXY8 1006 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.41
PTPN1-201ENST00000371621 RNF169Q8NCN4 708 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 ATXN2LQ8WWM7 1075 aaKnown RBP12.46□□□□□ -0.41
PTPN1-201ENST00000371621 LZICQ8WZA0 190 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 HSPBAP1Q96EW2 488 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 PWWP2AQ96N64 755 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 APOL6Q9BWW8 343 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 ROPN1BQ9BZX4 212 aaPredicted RBP12.46□□□□□ -0.41
PTPN1-201ENST00000371621 ROPN1Q9HAT0 212 aaPredicted RBP12.46□□□□□ -0.41
PTPN1-201ENST00000371621 ZC4H2Q9NQZ6 224 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 NDUFA13Q9P0J0 144 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 STK36Q9NRP7 1315 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 SIGLEC1Q9BZZ2 1709 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 ALKQ9UM73 1620 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 BOLA2-SMG1P6H3BVE0 249 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 MMP13P45452 471 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 BPIFB4P59827 614 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms