RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 PRKCBP05771 671 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 SCP2P22307 547 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 MAGEA9P43362 315 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 LRRC8EQ6NSJ5 796 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 SLC30A5Q8TAD4 765 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 PGBD4Q96DM1 585 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 RNPC3Q96LT9 517 aaKnown RBP23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 TEX12Q9BXU0 123 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 MRFAP1Q9Y605 127 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 ADGRL3Q9HAR2 1447 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 OCA2Q04671 838 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 DACH2Q96NX9 599 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 RFX7Q2KHR2 1363 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 KCNN4O15554 427 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 MTMR2Q13614 643 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 TEDDM1Q5T9Z0 273 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 NAF1Q96HR8 494 aaKnown RBP23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 ETNK1Q9HBU6 452 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 GOLGA8RI6L899 631 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 ZNF185O15231 689 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 ORC4O43929 436 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 ZFXP17010 805 aaPredicted RBP23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 MFSD14CQ5VZR4 134 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 PIN4Q9Y237 131 aaKnown RBP23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 RTN2O75298 545 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 C16orf87Q6PH81 154 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 MS4A14Q96JA4 679 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 ZNF560Q96MR9 790 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 CPA5Q8WXQ8 436 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 ISCA1Q9BUE6 129 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 ASPSCR1Q9BZE9 553 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 NEUROG2Q9H2A3 272 aa23.41■■□□□ 1.34
TM9SF3-201ENST00000371142 MYO1CO00159 1063 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 GGPS1O95749 300 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 CUL3Q13618 768 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 NEDD1Q8NHV4 660 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 PLEKHA5Q9HAU0 1116 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 PFASO15067 1338 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 RALAP11233 206 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 ATP6V1E1P36543 226 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 SESN2P58004 480 aaPredicted RBP23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 TAP1Q03518 808 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 MDH1BQ5I0G3 518 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 AIPL1Q9NZN9 384 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 PYGLP06737 847 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 TTC39CQ8N584 583 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 STOML1Q9UBI4 398 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 FBXO2Q9UK22 296 aaPredicted RBP23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 DAB2P98082 770 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 HIF1AQ16665 826 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 TUFT1Q9NNX1 390 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 MYO1DO94832 1006 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 AP3M2P53677 418 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 CDK17Q00537 523 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 ACTN3Q08043 901 aaPredicted RBP23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 LRRC23Q53EV4 343 aaPredicted RBP23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 OR6J1Q8NGC5 347 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 FAM167BQ9BTA0 163 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 MTA3Q9BTC8 594 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 HSPBP1Q9NZL4 362 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 MAP3K4Q9Y6R4 1608 aa23.4■■□□□ 1.34
TM9SF3-201ENST00000371142 A0A1W2PQC6 194 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 ATICP31939 592 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 TPI1P60174 286 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 DHX34Q14147 1143 aaKnown RBP23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 METTL16Q86W50 562 aaKnown RBP23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 TMEM143Q96AN5 459 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 ZCCHC17Q9NP64 241 aaKnown RBP23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 WDR72Q3MJ13 1102 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 DPF2Q92785 391 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 AGAP3Q96P47 875 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 TJP2Q9UDY2 1190 aa23.39■■□□□ 1.34
TM9SF3-201ENST00000371142 AFF2P51816 1311 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 ZSCAN9O15535 394 aaPredicted RBP23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 ACOT2P49753 483 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 STAT5BP51692 787 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 TAGAPQ8N103 731 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 GTPBP10A4D1E9 387 aaKnown RBP23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 TXNP10599 105 aaKnown RBP23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 HLA-DPA1P20036 260 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 RGS7P49802 495 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 TEKT4Q8WW24 435 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 CHCHD3Q9NX63 227 aaKnown RBP23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 SGMS1Q86VZ5 419 aa23.39■■□□□ 1.33
TM9SF3-201ENST00000371142 PRDM15P57071 1507 aaPredicted RBP23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 FAM95CA0A1B0GW59 222 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 PRMT1Q99873 361 aaKnown RBP23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 TRIM54Q9BYV2 358 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 ARHGAP31Q2M1Z3 1444 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 ALDH18A1P54886 795 aaKnown RBP23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 CEP55Q53EZ4 464 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 GRAMD4Q6IC98 578 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 STOX1Q6ZVD7 989 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 CATSPER3Q86XQ3 398 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 CLMNQ96JQ2 1002 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 SMIM5Q71RC9 77 aa23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 SYF2O95926 243 aaKnown RBP23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 SPATA2LQ8IUW3 424 aaPredicted RBP23.38■■□□□ 1.33
TM9SF3-201ENST00000371142 LRRC1Q9BTT6 524 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms